Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1544 ATGATTTTGAGCCTTAGAGTTTTACTTATAAGTTCACACACAAACACTTGTTGTTTCTTCTCACTCCCTCTCAATATGGACATAGATTCTTCAGGAGGCACATCCAATTGGCTCTACGATTATGGCTTTGATAACATCTCTGTGGCAGACTTCATGGCTCCAGACTCTGCTGCTTTCACCTGGCTGCCTCAACCTCAGCCTCACACCAATTTCAAGCCTCCTTCTTCCAATATCAGCTTGGAAATGGAATACTCAGTGGATTCAATTGTGCTGGAAGGTGGCCCTTCAAAACGGTTGAGGACTGAATCATGTGCATCTGGAACCAAGGCATGTCGAGAGAAATTGCGAAGGGACAAACTGAATGAGAGGTTTCTGGAACTGAGTTCCATCTTGGAGCCTGGTAGCATGCAGCCCAAAACCGACAAGGTTGCCATATTAAGTGATGCCGTCCGAGTCGTAAACCAATTAAGAGATGAAGCAGAGAAGCTGAAGGAAATGAATGATGAAATGCTTGAAAAAATTAAAGAGCTCAAGGCTGAGAAGAATGAGCTTCGGGATGAGAAAAATAGGCTCAAGGTAGAGAAAGAGAAGTTGGAGCAGCAGTTCAAGATGACAAATGTTCAGCCAAGCTTCCTCCATCATGCTCCGGCGGCCACGAAAGCACAAGGTGCTAGCCAAAAGCTGATACCCTTCATAGGTTACCCTGGCATAGCCATGTGGCAGTTTATGCCCCCAGCTGCAGTTGATACATCAAAGGATCATCTCCTTCGTCCACCAGTGGCATAA 786 0.4567 MILSLRVLLISSHTNTCCFFSLPLNMDIDSSGGTSNWLYDYGFDNISVADFMAPDSAAFTWLPQPQPHTNFKPPSSNISLEMEYSVDSIVLEGGPSKRLRTESCASGTKACREKLRRDKLNERFLELSSILEPGSMQPKTDKVAILSDAVRVVNQLRDEAEKLKEMNDEMLEKIKELKAEKNELRDEKNRLKVEKEKLEQQFKMTNVQPSFLHHAPAATKAQGASQKLIPFIGYPGIAMWQFMPPAAVDTSKDHLLRPPVA* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1544 261 Gene3D - 107 185 IPR036638 GO:0046983
Ahy8g1544 261 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 104 156 IPR011598 GO:0046983
Ahy8g1544 261 Coils Coil 146 208 - -
Ahy8g1544 261 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 96 170 IPR036638 GO:0046983
Ahy8g1544 261 CDD bHLH_AtILR3_like 109 185 - -
Ahy8g1544 261 Pfam Helix-loop-helix DNA-binding domain 108 156 IPR011598 GO:0046983
Ahy8g1544 261 SMART finulus 110 162 IPR011598 GO:0046983
Ahy8g1544 261 PANTHER BHLH TRANSCRIPTION FACTOR 26 261 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Ahy8g1544 261 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 26 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1544 Ahy-Chr8 32228972 32231278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1544 89 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51070 61.798 4.81e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy8g1544 HLH 8.00E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1544 - - aip:107613798 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0763 18 8394496 8396784 Ahy8g1544 8 32228972 32231278 hybridization