Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1539 ATGTGCAAAGGTCCACAAGGAAAAGGGCATGCCTCAACAAGAGGAATAGCTTCTTCTTCTTCTACATGTTGTTGTGAGTTATGTGGATTAAGGGCTTCATTGTATTGCCATGCTGATGATGCATATCTATGTAGAAAATGTGACAGATGGGTTCATGAAGCAAATTTCTTGGCCCTTAGACACATTAGATGCTTTCTCTGCAACACATGCAGCAATCTCACAAGAAGATGTGTTATTGGTGCTTCATCAGAGGTTATTCTTCCTGTTAATGTAAGTTGGGCCAATGGAAATCTTCCTAACAACAGCACCAACACAACAACAACATGTTCAAGAATAATGCATGATAACAATGATGATGGTGATGATGATATTGCTCTTTCCTTGTCTCTTTGA 393 0.3919 MCKGPQGKGHASTRGIASSSSTCCCELCGLRASLYCHADDAYLCRKCDRWVHEANFLALRHIRCFLCNTCSNLTRRCVIGASSEVILPVNVSWANGNLPNNSTNTTTTCSRIMHDNNDDGDDDIALSLSL* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1539 130 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 14 97 - -
Ahy8g1539 130 SMART bboxneu5 20 66 IPR000315 GO:0008270
Ahy8g1539 130 PANTHER B-BOX ZINC FINGER PROTEIN 29 14 97 - -
Ahy8g1539 130 CDD Bbox1_BBX-like 24 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1539 Ahy-Chr8 32183707 32184099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1539 25 104 C2C2-CO-like Transcription Factor Family AT3G21890 51.852 1.98e-23 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1539 - - aip:107610340 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0758 18 8344333 8344728 Ahy8g1539 8 32183707 32184099 hybridization