Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1538 ATGGAACCCCTATGTGAATTTTGTGGGGTTGTAAGAGCTGTGGTGTATTGCAAGTCAGATTCTGCGCGCCTATGCCTTAACTGTGATGCATCTGTGCACTCTTCCAATCCCCTGTCAAGCCGGCACGCGCGCTCTCTTCTCTGTGATCTCTGCTATTGCCATGCAGCTGTTGTTTGTTGTGTAGATCATAACATGTGTGTGTGTGAAGCCTGCGAATGGAAGCAGAATGAGTGCTTATTGAGGGGACATGGCCGCCTGCTGTTGAAGTTCTATACCGGTTGTCCTTCTTTTGAGGACTTGTCTAGGCTTTGGTCCTTTGTGTTTGATGCTAACTCCTCATGTGGTGATGGTTTGGAACCAATTAGTACAGTGTGTGTGGAAAAACCTGATAATGATGATGGTTTATTTGATTTGGTGAGTGACAAGTTGAATGAGATACAACCGTTCTTCAAATTCAAGCCTTGGACGGATCTGTCTCCCATGATTCCATCAAATCAAGATACCATGCAATTCTGCAAAGATCAAGCACTTTTTTCCCCTCCAGAATCAAACCAGCCAAAGCTGCAGGGATGTTCTAATTTCAACTATCTTGGAATCGATGAAGGAAATGGTTTATGTGAAGGTCTAACTGTGGATGGTGTTATTCAGTTAAACTTTGAAAATGCTGATGAATTAGACTGTGTATTAATGGATAATAACATATCAGTGACAGAATCTAAATGTCCTTCTGCGGATTCCATTGAGGCATCATCATCAGTCCAACAAGATTTTGTAACCTTTCAATCTCCGAGCATGACGCCGACCTTCCACAGTAATGTGAATTGTGCTCTTGTGAGTCCTATTTACAACAGAGACATGAAACTTGGATTCCCTCAGGATCAAGTTCATTCCAGCATATCGATGGAATTATCCAACATTGCTGGAGACAGTAGTGCTACTGATCTAGCTTGTGAGTTGTCCAATGAGATACAATGCCCAGAGAGAAGGGCCAAAGCTAAAATGAGATACAATGAGAAAAACAAAACCCAAATGTTTGGCAAACAAATAAGATATGCATCTAAGAAAGCGAGGGCCAAGGCAAGAAAACGAGTGAAAGGTAGATTTGTTAAGACAGGAAGAAGAATATGA 1128 0.4202 MEPLCEFCGVVRAVVYCKSDSARLCLNCDASVHSSNPLSSRHARSLLCDLCYCHAAVVCCVDHNMCVCEACEWKQNECLLRGHGRLLLKFYTGCPSFEDLSRLWSFVFDANSSCGDGLEPISTVCVEKPDNDDGLFDLVSDKLNEIQPFFKFKPWTDLSPMIPSNQDTMQFCKDQALFSPPESNQPKLQGCSNFNYLGIDEGNGLCEGLTVDGVIQLNFENADELDCVLMDNNISVTESKCPSADSIEASSSVQQDFVTFQSPSMTPTFHSNVNCALVSPIYNRDMKLGFPQDQVHSSISMELSNIAGDSSATDLACELSNEIQCPERRAKAKMRYNEKNKTQMFGKQIRYASKKARAKARKRVKGRFVKTGRRI* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1538 375 CDD Bbox1_BBX-like 4 47 - -
Ahy8g1538 375 ProSiteProfiles CCT domain profile. 329 371 IPR010402 GO:0005515
Ahy8g1538 375 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Ahy8g1538 375 SMART bboxneu5 1 47 IPR000315 GO:0008270
Ahy8g1538 375 PANTHER CCT MOTIF FAMILY PROTEIN-RELATED 2 373 - -
Ahy8g1538 375 Pfam CCT motif 329 371 IPR010402 GO:0005515
Ahy8g1538 375 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1538 Ahy-Chr8 32180572 32181981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1538 1 372 C2C2-CO-like Transcription Factor Family AT3G21880 33.503 8.61e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy8g1538 CCT 1.90E-12 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0757 18 8341210 8342617 Ahy8g1538 8 32180572 32181981 hybridization