Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1520 ATGGAGGTGCACTTATTTACAAGGCATGGCAGCATGGTGATGGTGTTGTTCCTCTTTGTTTTCTGCTTCTGGATTCCAGTAGAAGTGGTGGGGAGGACAGGAGCTACCATTGGAAACGCTACCGTTTCTTCTTCGAGTCCAAGAGTTTTGAAAATTGGGGTGCTGTTTACTTTGAATTCTGTCATTGGAAGATCTGCTAAAGCTGGTGTATTGGCTGCTATTGATGATGTTAATGCTAACAAAAGCATCCTTCGTTCGACTAAACTTGAAATTATGTTGCATGATACAAATTGCAGCGGGTTTCTTGGAACCGTGGAAGCTCTGCAGTTGATGGAGAATGAAGTGGTTGCTGCAATTGGTCCACAATCATCTGGAATAGCTCATGTCATCTCTCATGTGGCTAATGAACTCCACATGCCTCTTCTTTCATTCGCGACAGACCCTGCTCTAGTGTCACTCCAGTATCCATATTTCATCCGCACCACGCCAGATGACTATTTCCAGATGTATGCAATTGCAGACTTGGTTGATCACTATAGGTGGAGGGAGGTAATAGCTATCTTTGTAGATGATGACAATGGAAGAAATGGAATTTCAGTGTTGGGCGATGCACTTGCTAAGAAACGTGCCAAGATATCTTACAAGGCTGCATTCCCTCCTGGAGCCCCCATGAGTAATATCAGTGACTTGTTGAATCAGGTGAACCTGATGGAATCACGTGTTTATGTGCTGCATGTTAATCCTGATTCTGGCTTGTCAATTTTTGCACTTGCCAAAAAGATTGGGATGATGACTAGTGGCTATGTGTGGATTGCAACAGATTGGCTTCCTTCTGTGCTGGATTCTATGGAGCAGGTTAACACTGACACCCTTAATATACTACAAGGAGTTGTTGCTCTGCGGCATCACACGCCTGACACTGATCTTAAGAAGAGTTTCATCTCAAATCTGAAGAGCAGAAAGAACAATGAGACTGCAGGCTTCAATTCTTATGCATTCTATGCATACGATTCTGTTTGGTTAGCAGCGCGTGCTCTGGATACTTTTCTCAATGAAGGTGGAAACATATCTTTCTCCTCGGATCCTAAGTTGCAAGACACAAATTCAAGTATGTTGCATTTTTCAGCACTCCGTGTGTTTGACGGCGGTGATAAGTTTCTTCAGACAATTCTGAAAACAAACTTCACTGGTGTGAGTGGCCCAGTTCAGTTTGGTATGGATAAGAATTTGATTCATCCAGCTTATGATATCATGAATATCGGCGGGTTTGGAACTCGTAGGATTGGTTATTGGTCTAATTATTCTGGTCTCTCAGTTATAGCTCCTGAAATTTTGTATCTGAAACCACCTAACGCTTCGGCAAGCAACCAACACCTATATAGTGTTATATGGCCTGGAGAAACAACAGTTACACCAAGGGGATGGGTATTCCCAAACAATGGGAAACCATTGAGAATCGCAGTGCCTAATAGAGTAAGCTATTTGGAGTTTGTTGGTAAGGACAAGAACCCTCCTGGGGTAAAAGGCTATTGCATTGATGTCTTTGAAGCAGCCATAAAGTTGTTGCCTTATCCTGTTCCAACAGAATATATATTATATGGTCATGGTGATAGAAATCCCAGCTATGATGACCTTGCATATCAGGTTGCACAAAATAACTTTGATGCAGTTGTTGGAGATATTACAATTGTCACCAACAGGACAAGGATTGTGGATTTTACTCAGCCTTACATGGAATCAGGGCTGGTGGTTGTTGTTCCTGTTAAGGAAATCAAGTCAAGCCCTTGGTCCTTTCTAAAGCCATTCACCACTAAAATGTGGTTAGTTACTGGTGCATTCTTTCTCTTCGTGGGAGCCGTCGTGTGGATTCTTGAGCACCGGCACAATGAAGAATTCCGCGGTCCTCCAAGGAAACAAATTATAACAGTGTGTTGGTTTAGTTTCTCAACAATGTTTTTCTCACACAGAGAGAACACTGTGAGTGCACTCGGTCGATTGGTTCTACTCATATGGCTTTGGGTGGTTTTAATCATCAATTCAAGCTACACAGCTAGCTTAACATCCATCCTCACAGTGCAGCAACTTTCATCACAGATTGAAGGAATTGACAGCTTGATCTCAGGTACTCAACCAATTGGAATCCAAGAAGGATCTTTTGCGAAAAAGTATCTGACAGATGAACTCAACATAGCACCATCTAGGATAGTTACACTGAAAAATATGGAGGCATATGTTGATGCCCTTGAACGCGGACCAAGGAATGGAGGGGTTGTGGCCATTGTTGATGAGCTTCCTTATATTCAGCTCTTCATGTCCAATACCAACTGTAAGTTCAGAACAGTTGGACAGGAGTTCACTAAAAGTGGTTGGGGATTTGCATTCCAAAGGGATTCACCGCTTGCTGTTGATTTGTCAACTGCCATCCTTCAACTTTCGGAGAACGGGGAACTGCAAAAGATCCATGACAAATGGCTTTTGAAGCGAGACTGCACTGCGCAACTCAATGTTGAAGACTCAAATAAACTGTCTCTGAGTAGCTTCTGGGGCCTCTTTCTCATATGTGGCATTGCATGCTTCCTTTCTTTGGTTGTATTCTTTGTTAGAGTGTTCTGTCAATACACCAGATTTAGCCCTGATCCTGAACAAGTTGATGTGGAAATTCAACCAAGGCCTCCTAGAAGGAACCTCAAAAGTACTAGTTTCAAGGACTTGATGGAATTTGTGGATACCAAAGAAAAAGAAATCAAAGAGAGACTTAGGAATAGTAAAAGGAGAAGAAGCCAGAGTCTAGATGAGCAATCTAGTTCATCACCCTCCTAA 2820 0.4252 MEVHLFTRHGSMVMVLFLFVFCFWIPVEVVGRTGATIGNATVSSSSPRVLKIGVLFTLNSVIGRSAKAGVLAAIDDVNANKSILRSTKLEIMLHDTNCSGFLGTVEALQLMENEVVAAIGPQSSGIAHVISHVANELHMPLLSFATDPALVSLQYPYFIRTTPDDYFQMYAIADLVDHYRWREVIAIFVDDDNGRNGISVLGDALAKKRAKISYKAAFPPGAPMSNISDLLNQVNLMESRVYVLHVNPDSGLSIFALAKKIGMMTSGYVWIATDWLPSVLDSMEQVNTDTLNILQGVVALRHHTPDTDLKKSFISNLKSRKNNETAGFNSYAFYAYDSVWLAARALDTFLNEGGNISFSSDPKLQDTNSSMLHFSALRVFDGGDKFLQTILKTNFTGVSGPVQFGMDKNLIHPAYDIMNIGGFGTRRIGYWSNYSGLSVIAPEILYLKPPNASASNQHLYSVIWPGETTVTPRGWVFPNNGKPLRIAVPNRVSYLEFVGKDKNPPGVKGYCIDVFEAAIKLLPYPVPTEYILYGHGDRNPSYDDLAYQVAQNNFDAVVGDITIVTNRTRIVDFTQPYMESGLVVVVPVKEIKSSPWSFLKPFTTKMWLVTGAFFLFVGAVVWILEHRHNEEFRGPPRKQIITVCWFSFSTMFFSHRENTVSALGRLVLLIWLWVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISGTQPIGIQEGSFAKKYLTDELNIAPSRIVTLKNMEAYVDALERGPRNGGVVAIVDELPYIQLFMSNTNCKFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGELQKIHDKWLLKRDCTAQLNVEDSNKLSLSSFWGLFLICGIACFLSLVVFFVRVFCQYTRFSPDPEQVDVEIQPRPPRRNLKSTSFKDLMEFVDTKEKEIKERLRNSKRRRSQSLDEQSSSSPS* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1520 939 Gene3D - 72 412 - -
Ahy8g1520 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 928 - -
Ahy8g1520 939 PANTHER GLUTAMATE RECEPTOR 3.4 38 928 - -
Ahy8g1520 939 Gene3D - 596 719 - -
Ahy8g1520 939 MobiDBLite consensus disorder prediction 918 939 - -
Ahy8g1520 939 SUPERFAMILY Periplasmic binding protein-like II 459 826 - -
Ahy8g1520 939 Pfam Receptor family ligand binding region 68 420 IPR001828 -
Ahy8g1520 939 PIRSF IGluLR_plant 9 939 IPR017103 -
Ahy8g1520 939 Gene3D - 479 595 - -
Ahy8g1520 939 SUPERFAMILY Periplasmic binding protein-like I 44 476 IPR028082 -
Ahy8g1520 939 Gene3D - 164 437 - -
Ahy8g1520 939 CDD PBP1_GABAb_receptor_plant 51 439 IPR044440 -
Ahy8g1520 939 Gene3D - 720 828 - -
Ahy8g1520 939 CDD GluR_Plant 482 825 - -
Ahy8g1520 939 Pfam Ligand-gated ion channel 827 858 IPR001320 GO:0015276|GO:0016020
Ahy8g1520 939 SMART GluR_14 485 827 IPR001320 GO:0015276|GO:0016020
Ahy8g1520 939 Pfam Bacterial extracellular solute-binding proteins, family 3 504 826 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1520 Ahy-Chr8 31972299 31977193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1520 47 792 Ion Channels AT1G05200 68.541 0.0 1100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1520 K05387 - gmx:100799912 1409.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0737 18 8100937 8105775 Ahy8g1520 8 31972299 31977193 hybridization
Ahy8g1520 8 31972299 31977193 Ahy13g1412 13 17870469 17875191 PCT