Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy8g1519 | ATGAAGTCGTTTGTTGTTTCCCACCTTGTGATTTGGACCATCTTTTGTGGTGGTATTTTCTGCAGTAGGCCTGCAAGTGTGAACATTGGTGCAGTCTTCACCTTCGATTCGGTCATAGGTAGAGCTGCAAAGGTGGCCATGAAAATGGCCGTTGATGATGTCAATGCTGACCCTAGAGTCCTCAATGGCACCCACCTCAACTTGATAATGAAGGATGCTGCCTGCAGTGTCTTTCTGGGAGCTATTGGAGCTTTTCAGGCACTCGAGGAAGGGATTGTAGCAATGGTTGGTCCACAGTCGTCTTCTATAGCTCATATGGTATCTCAAATTGCTGATGCTCTCCATGTGCCTCTTGTCTCATATGGTGCCACTGATCCTACCCTGTCCTCCCTTCAGTTCCCTTACTTTTTTCGTACTATACAAAGCGACTTGGAGCAGATGATTGCGGTAGCTGATCTAATTGAATTCAATGAATGGAAGGAGGTCATTGCTGTATACTTGGATGATGATTATGGAAGAAATGGAATGTCGGCTTTGAGGGATGAACTTGAAAATAGGAGATTGAAAATTGCTCATAAGCTACCTTTGAGTATTCAGTTTGATCCAAATGAAATCACCACTTTGCTGAACCAATCCAAATTGTTTGGTCCTCGTGTGTATGTTGTTCATATCAACCTGGATCCAAAACTGAGATTTTTCAATATTGCCAACAAACTTAAAATGATGACCAAAGACTATGTTTGGCTAGTCACTGATTGGCTCTTTGCTACCTTAGATTCTTTCTCCACAGTGAATCAGACCTCTCTCAGTGTTCTCCAAGGGGTTGTTGGTTTTCGTCAGCATATTCCAGATTCCCGAAAGAAGAGAGGTTTCGTTTCAAAATGGAGAAATGCACATAAAGGTATGCCAAATGGTAGTTTGAATGCCTATGGATACTATGCTTATGATACAATATGGGCAGTTGCGCGATCAATTGACAGATTCATTAGATTGCATAATAATATTACCTTTGTAGTTAATCACGAGAATAAGCCATCTCACACACAAGGAAATGATCTTCAGCTTGACAAGCTCAAAATCCTTGCTAGTGGATCTGATCTGGGCAGTATATTATTACAGTCAAATTTTACTGGTGTGAGTGGTCGAGTTCAGTTTAATTCAAACAGGAATATCATAAGTGGTGGTTATGATGTTATAAATATCAATCAGAGTGCAATGACTACGGTTGGTTATTGGTCTAATTGCTCAGGCTTTTCAGTCATCCCCGCTGAAAATCTTAAGACTAAGAAATGTAAAAGGTTAACTCAAGATCATAAGCTTGGCAATATTACTTGGCCTGGTGGAGGGACAGAAAGACCCCGCGGCTGGGTGATTGCTGATAATGGAAGACCACTGAGAATTGGAGTACCACGTAGAGCAAGTTTTGTTGAATTTGTGACTGTGAAGGATCATCAAATTCTAGGGTACTGCATTGATGTCTTCAACAAGACCCTGGAATTTATTCCATATGATGTTCCTTACCGTTTCATCCCTGTTGGGAATGGTAAATCAAATCCAAGCTATGATGAACTCGTGAAAAATGTTGCTGACAGTGTATATGATGCAGTTGTCGGCGACATTGCAATTGTGACGAACCGTACACAATATGTGGATTTTTCTCAGCCTTATGCAACAACTGGCCTTGTTATAGTGGCTCCTGTCGACAATGCAAGATCAAATGCTTGGGTGTTTCTCCAACCATTCACAGCAGATATGTGGTGTGCTACGGCTGCTTCATTCGTGATGATTGGAGTGGTTATATGGATTCTTGAGCACCGAGTCAATGATGACTTCCGTGGTCCTCCTAAGAGACAACTGGTGACAGCGTTTATGTTCAGCCTCTCAACACTGTTCAAGACAAACCAGGAACGGACGGTAAGCTCGCTATCCAAAATGGTGATGATAGTCTGGCTTTTCCTATTGATGGTGATCACTGCTAGCTATACAGCAAGCTTGACTTCAATTCTTACAGTGGAGCAGCTCTCATCGCCCATCACAGGAATCGATAGCTTGATTGCGAGCAATTGGCCCATAGGATACCAAGTAGGATCTTTCGCTTACAGCTATCTCACGGATAGTCTTTATATATCAAAATCAAGACTTGTTCAGCTAGGCTCTCCGGAGGAATATGCTAAAGCTCTGAAGAAGGGGCCCTCTAATGGAGGGGTGGCGGCTATCATCGATGAGCTTCCTTACGTGGAGTTATTTCTGTCAAAAGAAACTGGGTTCGGTATCATTGGACAGCCATTTACCAAAAGCAGTTGGGGATTTGCTTTCCAAAAAGAGTCTCCTCTCGCCCTCGACATGTCCACGGCTATTCTAAAACTCGCCGAGAGCGGAGAGCTCCAGAAGATACATGACAAGTGGCTCTGCAAGATGGGTTGCTCTGAAAAAACAACAAGCAACTCCAAGCCTGACCAACTTCACTTAATTAGTTTTTGGGGTCTGTATCTGTCATGTGGTGTTGTCACACTCGCCTCGCTTTTGGTGTTTCTTCTGCGAGCGATTCGCCAATACGCTCGCTTCAAACGACGGGAAAAGGACATTGCTGTCGCCTCATCGTCGGAACCATCAAAGACCAGCAGCCATTGTTCCCAGGTTCTCCTTAACTTCTTCAACTTCATTGATGAAAAAGAAGAGGCCATAAAGAAAATGTTCACTCAATGTGACAATCCTGAACCTCAAGTCAGATAA | 2733 | 0.431 | MKSFVVSHLVIWTIFCGGIFCSRPASVNIGAVFTFDSVIGRAAKVAMKMAVDDVNADPRVLNGTHLNLIMKDAACSVFLGAIGAFQALEEGIVAMVGPQSSSIAHMVSQIADALHVPLVSYGATDPTLSSLQFPYFFRTIQSDLEQMIAVADLIEFNEWKEVIAVYLDDDYGRNGMSALRDELENRRLKIAHKLPLSIQFDPNEITTLLNQSKLFGPRVYVVHINLDPKLRFFNIANKLKMMTKDYVWLVTDWLFATLDSFSTVNQTSLSVLQGVVGFRQHIPDSRKKRGFVSKWRNAHKGMPNGSLNAYGYYAYDTIWAVARSIDRFIRLHNNITFVVNHENKPSHTQGNDLQLDKLKILASGSDLGSILLQSNFTGVSGRVQFNSNRNIISGGYDVININQSAMTTVGYWSNCSGFSVIPAENLKTKKCKRLTQDHKLGNITWPGGGTERPRGWVIADNGRPLRIGVPRRASFVEFVTVKDHQILGYCIDVFNKTLEFIPYDVPYRFIPVGNGKSNPSYDELVKNVADSVYDAVVGDIAIVTNRTQYVDFSQPYATTGLVIVAPVDNARSNAWVFLQPFTADMWCATAASFVMIGVVIWILEHRVNDDFRGPPKRQLVTAFMFSLSTLFKTNQERTVSSLSKMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNWPIGYQVGSFAYSYLTDSLYISKSRLVQLGSPEEYAKALKKGPSNGGVAAIIDELPYVELFLSKETGFGIIGQPFTKSSWGFAFQKESPLALDMSTAILKLAESGELQKIHDKWLCKMGCSEKTTSNSKPDQLHLISFWGLYLSCGVVTLASLLVFLLRAIRQYARFKRREKDIAVASSSEPSKTSSHCSQVLLNFFNFIDEKEEAIKKMFTQCDNPEPQVR* | 911 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy8g1519 | 910 | PANTHER | GLUTAMATE RECEPTOR 3.7 | 13 | 908 | - | - | |
Ahy8g1519 | 910 | Pfam | Bacterial extracellular solute-binding proteins, family 3 | 483 | 803 | IPR001638 | - | |
Ahy8g1519 | 910 | PIRSF | IGluLR_plant | 1 | 909 | IPR017103 | - | |
Ahy8g1519 | 910 | CDD | GluR_Plant | 463 | 803 | - | - | |
Ahy8g1519 | 910 | Gene3D | - | 758 | 810 | - | - | |
Ahy8g1519 | 910 | Pfam | Ligand-gated ion channel | 804 | 835 | IPR001320 | GO:0015276|GO:0016020 | |
Ahy8g1519 | 910 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 100 | 128 | - | - | |
Ahy8g1519 | 910 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 314 | 326 | - | - | |
Ahy8g1519 | 910 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 40 | 56 | - | - | |
Ahy8g1519 | 910 | Gene3D | - | 142 | 417 | - | - | |
Ahy8g1519 | 910 | SUPERFAMILY | Periplasmic binding protein-like I | 21 | 457 | IPR028082 | - | |
Ahy8g1519 | 910 | Gene3D | - | 575 | 706 | - | - | |
Ahy8g1519 | 910 | SMART | GluR_14 | 466 | 805 | IPR001320 | GO:0015276|GO:0016020 | |
Ahy8g1519 | 910 | Pfam | Receptor family ligand binding region | 44 | 403 | IPR001828 | - | |
Ahy8g1519 | 910 | CDD | PBP1_GABAb_receptor_plant | 28 | 422 | IPR044440 | - | |
Ahy8g1519 | 910 | PANTHER | IONOTROPIC GLUTAMATE RECEPTOR | 13 | 908 | - | - | |
Ahy8g1519 | 910 | Gene3D | - | 457 | 574 | - | - | |
Ahy8g1519 | 910 | Gene3D | - | 45 | 393 | - | - | |
Ahy8g1519 | 910 | SUPERFAMILY | Periplasmic binding protein-like II | 443 | 803 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy8g1519 | Ahy-Chr8 | 31958097 | 31962792 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy8g1519 | 21 | 904 | Ion Channels | AT2G32400 | 56.629 | 0.0 | 1030 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy8g1519 | K05387 | - | gmx:100796389 | 1368.21 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy18g0736 | 18 | 8089031 | 8093738 | Ahy8g1519 | 8 | 31958097 | 31962792 | hybridization | |
Ahy13g1412 | 13 | 17870469 | 17875191 | Ahy8g1519 | 8 | 31958097 | 31962792 | PCT |