Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1508 ATGATCTCCAATAATAACAAGAACAATGAGGATGGTGAGTCTTGGAGAGATGATTTGAGAAAGGGGCCTTGGACGCCGAGAGAGGACGCCATACTTATCGAGCAGGTAGAGAAGTGTGGCAAAGGTAATTGGAGTTTAATTCGAAAGAATTCTGAGTTGAGGAGAAGTGGCAAAAGTTGTAGGCTTAGATGGTCGAACCATCTAAATCCTGACTTGAAGAAGGGTCCTTTCTCTGAAAAAGAGGAGAAAACCATTGATGATCTTCATGCTAAGTTTGGAAACAAATGGGCTCTAATGGCTACCAAGGTTTCTAGAAGATCAGACAATGACATCAAAAACTTTTGGAACTCAAGAATGAAGAAGCGCCTAAGAGAATATCCTCCACAAATAACGGTTCAACAAGCACAACACTTTTCTTCATCACCATTTTATTCGGTCTTAGCTTCATGTTACCCTAAAAATAATCTCAATGTTGAACTACCTTCAAATATTTCTGCTGCCAATCCTCCACCAAATCATAATCAGAAACAACCTAATCAAAATGATTCTTCTTCTTCTTCTTCTTCTTTCTCTTACACCAATAATAATGCAAGTTTTGTATTGCCATTAACCCATGTGTCTCCTTATTGTAAGAGTAGTGGCTTATTGAATGATGTGGTGATGGAGGGTAATGCTCTTTGTCGCAAGGGAAAGTCAAAGATGGATGCAACCATTGTTATTGGTAGGGAGGAAGAAGAATTAGCTGATAAGAGAAAAATTATTGAAGAGCCACCATTGCCACCAGTTGGAACCAGTAAAGAAGAAGAAATAGCCACCATTATTGCAACTCAAAGCTCTTCTCATCAATTGATTTCAACAGAGAAGAATGATAATGGAGGTTGTAACAATAACAAGGAGGCATTGAATAATTCTATGCCACAAATGGACGATGAATTGCTTAGCATACTTAAAAATTGTCCAATATATTCGCCAGTGCGAAAGTGGTACAAAGTTGATGATGATGAGGACTCCTTGATGATGATGGAGATTTGA 1032 0.3837 MISNNNKNNEDGESWRDDLRKGPWTPREDAILIEQVEKCGKGNWSLIRKNSELRRSGKSCRLRWSNHLNPDLKKGPFSEKEEKTIDDLHAKFGNKWALMATKVSRRSDNDIKNFWNSRMKKRLREYPPQITVQQAQHFSSSPFYSVLASCYPKNNLNVELPSNISAANPPPNHNQKQPNQNDSSSSSSSFSYTNNNASFVLPLTHVSPYCKSSGLLNDVVMEGNALCRKGKSKMDATIVIGREEEELADKRKIIEEPPLPPVGTSKEEEIATIIATQSSSHQLISTEKNDNGGCNNNKEALNNSMPQMDDELLSILKNCPIYSPVRKWYKVDDDEDSLMMMEI* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1508 343 Gene3D - 75 141 - -
Ahy8g1508 343 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 5 189 - -
Ahy8g1508 343 CDD SANT 76 116 IPR001005 -
Ahy8g1508 343 MobiDBLite consensus disorder prediction 161 190 - -
Ahy8g1508 343 Gene3D - 21 73 - -
Ahy8g1508 343 SMART sant 73 121 IPR001005 -
Ahy8g1508 343 SMART sant 20 70 IPR001005 -
Ahy8g1508 343 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
Ahy8g1508 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 123 IPR017930 -
Ahy8g1508 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 72 IPR017930 -
Ahy8g1508 343 CDD SANT 23 68 IPR001005 -
Ahy8g1508 343 Pfam Myb-like DNA-binding domain 24 83 - -
Ahy8g1508 343 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Ahy8g1508 343 MobiDBLite consensus disorder prediction 1 22 - -
Ahy8g1508 343 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1508 Ahy-Chr8 31719110 31722287 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1508 19 133 MYB Transcription Factor Family AT2G32460 61.345 8.45e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy8g1508 Myb_DNA-bind_6 3.70E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1508 K09422 - ahf:112771967 602.053