Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1499 ATGGATAACACCACTCTCACCACCACCACCACCGCCACCGCCACCAATTCACTTAAGCCCTTCCAAGTCAACCTCACCTGCTCCCTCCACCACCATGACAAGAGACCTCTCATTGATGAACACGACTTCTTCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCCCTCCTCCTCATCACCACCACCACAACACCATGAATTCTGATATCTTGGATTCCAAAGTAAACACTGGTCTGAATCTTCTTACTACCAACACGAGCAGCGATCAATCCGTTGTTGACGATGACATCTCACCGAATTCACACCAGAAAAGACCCGTCCCTGATCAGACGGTTGTTATTCTGGCGGAGCTGGAGCGAACGAAGGCGGAGAATCAACGGTTGAGAGAGAGGCTTGATCGTGTAACCGCGGAATACAAGGCCCTGCAGATGCAAGTGGTGGCTTTGATGCAACAACACAAGCCAGAGGAGGAGGAGGAGAAGAAGCAAGACGCAGCGCCAAGACAGTTCATGGATCTTGGATTGGCCACTAACGGTGCTGAGACGGGGGAGGAGGCTTCGCTTTCTTCGTCGGAGAGGTCGAAGTCTCCAGAGAGGAAGAATGGAAGCAGTGATGATCACGAAAAGAATAGCAGAGAGGATAGTCCCTTGGCTCCAAGAAATGTTGATCAAGCTGAAGCCACTATGAGAAAAGCTAGAGTCTCTGTTAGAGCTAGATCAGAGGCTCCAATGATGACGGATGGATGCCAATGGAGGAAATATGGGCAGAAGATGGCAAAAGGAAACCCATGTCCAAGAGCATACTACAGATGCACCATGGCTGCAGGTTGCCCTGTTAGAAAACAGGTACAAAGGTGTGCTGAGGACAGAACAATACTAGTAACAACATATGAAGGGAATCACAACCACCCTCTGCCACCAGCAGCAATGGCAATGGCACAAACAACATCTTCAGCAGCAAGAATGCTTCTCTCGGGATCAATGTCAAGCAGTGATGGCCTTATGAATGCTAACTTTCTAACAAGGACACTCCTTCCTTGCTCCTCAAGCATGGCCACAATCTCAGCCTCAGCACCATTCCCAACTGTCACTTTGGATCTCACTCACTCCCCTAACCCTTTGCAATTCCCAAACCACCAAAACCACTTCCAATTACCATTCCCTCACTCACCCCCTTCTTCATTGCTGCCTCACATCTTTGGCCACGCTCTTTATAACCACTCTAAGTTCTCAGGCCTTCAACTCTCTCAGGATGCTGATCCTTCTTCTCAGCCTCCCCCGCCGCCTCCGCAGCTCGCCGATTCAGTTAGTGCTGCCACTGCTGCCATTGCAGCTGATCCTAACTTCACTGCTGCTTTGGCAGCTGCTATTACTTCCATTATTGGAGGTGCACAACACCAAAACAATAATGGCAACACCAACAATAGCACTGTTGTTAATAATGGCAACAACACTAGTACTCCCAACAACAATACCAATGGAAGCAATAATAATATCAACAGTTCCAATTTCTCATCAGAGAACTAG 1524 0.4902 MDNTTLTTTTTATATNSLKPFQVNLTCSLHHHDKRPLIDEHDFFSASASASASAPPPHHHHHNTMNSDILDSKVNTGLNLLTTNTSSDQSVVDDDISPNSHQKRPVPDQTVVILAELERTKAENQRLRERLDRVTAEYKALQMQVVALMQQHKPEEEEEKKQDAAPRQFMDLGLATNGAETGEEASLSSSERSKSPERKNGSSDDHEKNSREDSPLAPRNVDQAEATMRKARVSVRARSEAPMMTDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILVTTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSSDGLMNANFLTRTLLPCSSSMATISASAPFPTVTLDLTHSPNPLQFPNHQNHFQLPFPHSPPSSLLPHIFGHALYNHSKFSGLQLSQDADPSSQPPPPPPQLADSVSAATAAIAADPNFTAALAAAITSIIGGAQHQNNNGNTNNSTVVNNGNNTSTPNNNTNGSNNNINSSNFSSEN* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1499 507 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 26 485 IPR044810 GO:0003700
Ahy8g1499 507 MobiDBLite consensus disorder prediction 413 433 - -
Ahy8g1499 507 MobiDBLite consensus disorder prediction 68 106 - -
Ahy8g1499 507 Coils Coil 114 151 - -
Ahy8g1499 507 PANTHER OS05G0567200 PROTEIN 26 485 - -
Ahy8g1499 507 ProSiteProfiles WRKY domain profile. 239 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy8g1499 507 Gene3D WRKY domain 229 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy8g1499 507 SMART WRKY_cls 244 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy8g1499 507 MobiDBLite consensus disorder prediction 190 215 - -
Ahy8g1499 507 MobiDBLite consensus disorder prediction 48 107 - -
Ahy8g1499 507 MobiDBLite consensus disorder prediction 467 507 - -
Ahy8g1499 507 SUPERFAMILY WRKY DNA-binding domain 237 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy8g1499 507 MobiDBLite consensus disorder prediction 179 238 - -
Ahy8g1499 507 Pfam WRKY DNA -binding domain 246 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1499 Ahy-Chr8 31527429 31529640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1499 35 474 WRKY Transcription Factor Family AT1G62300 51.967 4.04e-132 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy8g1499 WRKY 2.90E-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1499 - - aip:107613963 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0707 18 7481845 7484123 Ahy8g1499 8 31527429 31529640 hybridization
Ahy8g1499 8 31527429 31529640 Ahy13g1372 13 17012772 17016839 PCT
Ahy13g1372 13 17012772 17016839 Ahy8g1499 8 31527429 31529640 PCT