Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1483 ATGGGTGTCTCAGGGAAATGGATTAGATCATTGATTGGTCTAAAGAAGTCTGAAAAGGCAGAGTCTTCTGAGAAGGACCGAAATAAGGTTGGCAAGTCTCGGCATCAAAGAAAGCATTCGATTGAATTTGATAATGGTAAACTTCAAAATGAGCTTGATGATGATGTGACTCTGCCTATCAGAGATGATAATGATCGTTCAAACTCCGATGTCCATTATTCACCTTCTACTTCTCAACAAGCTCTTGATACTGCACATAATCACCAAATAATGAGGGAAGAATGGGCTGCCATTCGCATTCAAACAGCATTTCGAGGATTCCTGGCCAGAAGAGCACTAAGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCAGTAAGAAAACAAGCTGCAATAACATTGCGTTGCATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTCGGGCAAGGCGTGTCCGCTTGGCATTGGAGAGTCAGAATGAACAACAGAAAGTTCAGCAGCAGCTTGCAAATGAAGCTCGTGTTCGAGAAATAGAAGAAGGCTGGTGTGACAGTGTGGGATCTGTAGAAGAAATCCAAGCTAAAATATTGAAGAGGCAGGAGGCTGCAGCTAAACGTGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAGGCAGGATCAAGACACCAGGCTGCTTCATCTGGATTTGAACCAGATAAAAGTAGCTGGGGCTGGAATTGGTTGGAAAGATGGATGGCTGTTCGTCCTTGGGAGAACCGTTTTGTTGACACTAATCTAAGGGAGGGAGCAATGGTACATGAAAATGGAGCAATGGATGGTAAAAATGGAACCAGTGCTAACAGCAAACAAATTCTGTCAAACAATCATCAAAAACCTGCAAGTCAGAAAGCTGGACCGGTTCTTTCCGATGGCTGTGGTTCTTCACCTGGTAAGTCAGCAGGCTTGCAGGAAGTAGTGAACATTCAGGCTGTTAAGCCAAATGGTGAAAATGCTATTGAAGAAGCCAATTCAAAACCCAGGATTGGGTCAAGATCTCGTAGTAATCCAAAGGAGAGAACCTCTCAAGGAGATAAGCAGGCCAAAAAACGATTATCTCTGCCTAACAGCGGGGGAGGTCCTGGGGCTCAAACAGCAAGACATCCTAATAGAACAAATGTCAAAGGAACACTCAGCGCCCAAAAGCTCGGTAGGGATAAACCTAAGGTCAATGGAAGAGGGGATGTAAATCTTACTCAGCCAGTTCCACAGCATGCAGGTATGTAA 1284 0.4509 MGVSGKWIRSLIGLKKSEKAESSEKDRNKVGKSRHQRKHSIEFDNGKLQNELDDDVTLPIRDDNDRSNSDVHYSPSTSQQALDTAHNHQIMREEWAAIRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESQNEQQKVQQQLANEARVREIEEGWCDSVGSVEEIQAKILKRQEAAAKRERAMAYALAHQWQAGSRHQAASSGFEPDKSSWGWNWLERWMAVRPWENRFVDTNLREGAMVHENGAMDGKNGTSANSKQILSNNHQKPASQKAGPVLSDGCGSSPGKSAGLQEVVNIQAVKPNGENAIEEANSKPRIGSRSRSNPKERTSQGDKQAKKRLSLPNSGGGPGAQTARHPNRTNVKGTLSAQKLGRDKPKVNGRGDVNLTQPVPQHAGM* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1483 427 Gene3D - 94 135 - -
Ahy8g1483 427 MobiDBLite consensus disorder prediction 70 85 - -
Ahy8g1483 427 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Ahy8g1483 427 MobiDBLite consensus disorder prediction 351 366 - -
Ahy8g1483 427 MobiDBLite consensus disorder prediction 17 85 - -
Ahy8g1483 427 MobiDBLite consensus disorder prediction 336 427 - -
Ahy8g1483 427 MobiDBLite consensus disorder prediction 37 69 - -
Ahy8g1483 427 PANTHER IQ-DOMAIN 5-RELATED 2 377 - -
Ahy8g1483 427 SMART iq_5 92 114 IPR000048 GO:0005515
Ahy8g1483 427 SMART iq_5 115 136 IPR000048 GO:0005515
Ahy8g1483 427 MobiDBLite consensus disorder prediction 296 320 - -
Ahy8g1483 427 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
Ahy8g1483 427 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Ahy8g1483 427 PANTHER IQ-DOMAIN 5-RELATED 2 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1483 Ahy-Chr8 31271355 31276551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1483 1 412 IQD Protein Family AT3G22190 56.532 4.22e-125 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1483 - - gmx:100787148 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0687 18 7168350 7173514 Ahy8g1483 8 31271355 31276551 hybridization