Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1472 ATGGGGTTTTTGCTGAAAGAAGCTTTAAAGACTCTGTGCGGTCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATCGGATGCAACAATTCAAAACTATTGATCTGGGAAGAATGTTATTATGAACCATTGCCATGTTCTTTCCCACAACCAAATTTTGGGAATGGAGAAGGAAGCTGGTTTTCTTCTGAGTCTCACTCGTCTCAGATGGGGATCCAAGAGGAGGACAGAGTTTGTTCTTTGATTAACAAAATGACAGTGAATAATTCAGTCAATATCGCAGGTGAAGGAATAATTGGACGTGCTGCATTTACTGGCAACCATCAGTGGATTCTTTTCAACAATTTCAGTAGAGATGCATATCCACCTGAGGTATATGCTGAGATGCATCACCAACTTTCAGCTGGAATGCAGACTGTTGCAGTGATTCCTGTGCTTCCCCATGGGGTTGTTCAACTTGGATCTTTCTTGCCAATAATGGAGAATATTGGGTTTGTAAATGATGTAAAGAGCTTGATCTTGCAACTTGGATGCATTCCCGGTGCCCTTCTATCGGAAGATTATTCAGGAAGTCCTTCCATTGGAAGAGCACTTGCTACTGGTGGCTTGCCTGTCTCTGTCAAACCACCTGCAATTCCCTCACATTGCATTCCATCAGTATCTAATGGTTCAAATGAGCAAAGTAACCCATCTCATGTTTCAAGGCCAACTGTTCAAACACTCTGTCCTATAAGGGGAGAAATGAATAACTTCCAAGGTTCAGTATTGACTCCCAAAACTAATAACCTGAGCCAGATATCAAATGGTTATTGCCAACCAAATGCTACTACATTGATTAAAACAAACTTTGCTGGCCAAAGTGAGAATAGGGTTGTGGAGGCTGAAGTGATACCCTCAAGCAGAGGTTCATGCCTACAGCAGCCTTCTGTTTCATATAATGCAAGATCTGCATTCAATGGCTTATCCAGTTTCGGTCAATCAGTTCCAAGCGATTGCAATCTAAAATATATGGAGCAACAAATGATGTCAGTCCTTGGGAATCAAGGTCACAGTAATCCTAGTATAAATGCATCAAGTACATTAAACATGTCTCTACTAAAGACAGATGGAGGCCATATACTTGGTCACAATCAAAGTTCTAGCAGTGCTTCATTACTTGCTGGAATACCAATACATGGTGGGGTGAGTAGTCTTTTGAGGACAAGTCTTGTTACTGATTCTGGTTTAAGAACTCCAGATGTGTCCGTTGGTGATTTATCCGGAGCACAAGGCGGTGGGTTTGGAGTTAAAAGTGATGGTTCAAGTGAAGCAGGTGGTTGTTCTCTGGCTAATTTTTTCAGTCATTCAGGTTCCTTTACTGTGCCTACGGAAGGTTCTGATCAGAAGCTTCTCTCTGTAGATGTGAAGGATGTTCATGACGCTTTACCTTCAAAGCCTGTGACTACCGGAGGTCAAAGCCCTGATTTTGTCCAAGATTGTGTTAATAAACATGTTACTGGTCGATCTATGGTGAAGAATGTTAAACAAGAACAAGTTTGTGCTCAACCGTCATCAGGTGATGATCTGTTTGATATTCTAGGAGCAGATTTCAAAAACCAACTTCTGAGTGGAAACTGGGATAAGTTGTTTGCTGTTGGATCTGAATCTAATACAGAAAATATGGATAAAAAGCCAACATGTATGAATATGCAGGGTATGAACTCTGATTATTACTCTGCAAGTGAAGCAATATCAGAGAGTGACATTTTTTCTGGGACAGGCACAGACCACCTCTTGGATGCTGTGGTTTCAAAGACCAAATCTGTCATGAAACAGAATTCTGATGACATGTCTTGCAGGACAACTTTGACAAGTAGTACCTGTTCAGTTCCCTCTCGTGCCTACAAGCCGGCTATGCCTGATCATATCCAGGGTGGGATGTTTGGTATTCCTAAGAGTGAGGGTAAAACAGGTGCTGTTGAAAATTCCATGAGGTCTGGATGTATTAAGGACGACGGTGGAAAGTGTTCCCAAACTTCTTCTATGTTTGGGTCCCAACTTAGTTCATGGGTTGAAAATAGTAGCAAGCTTAAGCTTGAAAATAGTGTTTCGACTGGATACTCCAAGCGACCTGATGAAGTTTGCAAATCGAATCGCAAAAGGCTTAAACCGGGAGAGAATCCTAGGCCTCGACCTAAGGATCGCCAAATGATTCAAGATCGTGTAAAAGAGTTACGGGAAATTGTGCCAAATGGAGCAAAGTGTAGCATAGATGCACTTCTGGAACGTACCATCAAGCATATGCTTTTTTTGCAGAGTGTGACAAAGCATGCTGACAAGCTGAAACAAACTGGGGATTCAAAGATTATCAGCAAGGAAGGTGGACTGCTTTTGAAAGACAACTTTGAGGGAGGGGCTACATGGGCATACGAGGTTGGCTCACAATCAATGGTTTGCCCTATTATAGTTGAGGATCTGAACCATCCTCGTCAGATGCTAGTGGAGATGCTTTGCGAGGAACGAGGTTTCTTTCTGGAAATAGCTGATTTAATCAGAGGATTAGGCTTAACTATACTAAAGGGGGTAATGGAAGCAAGAAATGACAAAATCTGGGCTCGTTTCGCCGTTGAGGCGAATAGGGACATAACAAGGATGGAAATATTTATGTCGCTGGTTCGGCTTTTGGACCAAACGGTGAAGGGAAATGCGTCTTCATCGAATGCAGGTGACAAGAACATGATGGCATATCAATCTTTTCCGCAAGCTACCCAGATTCCGGCAACTGGTAGGCCTAGTAGTTTGCAATGA 2787 0.4241 MGFLLKEALKTLCGRNQWSYAVFWKIGCNNSKLLIWEECYYEPLPCSFPQPNFGNGEGSWFSSESHSSQMGIQEEDRVCSLINKMTVNNSVNIAGEGIIGRAAFTGNHQWILFNNFSRDAYPPEVYAEMHHQLSAGMQTVAVIPVLPHGVVQLGSFLPIMENIGFVNDVKSLILQLGCIPGALLSEDYSGSPSIGRALATGGLPVSVKPPAIPSHCIPSVSNGSNEQSNPSHVSRPTVQTLCPIRGEMNNFQGSVLTPKTNNLSQISNGYCQPNATTLIKTNFAGQSENRVVEAEVIPSSRGSCLQQPSVSYNARSAFNGLSSFGQSVPSDCNLKYMEQQMMSVLGNQGHSNPSINASSTLNMSLLKTDGGHILGHNQSSSSASLLAGIPIHGGVSSLLRTSLVTDSGLRTPDVSVGDLSGAQGGGFGVKSDGSSEAGGCSLANFFSHSGSFTVPTEGSDQKLLSVDVKDVHDALPSKPVTTGGQSPDFVQDCVNKHVTGRSMVKNVKQEQVCAQPSSGDDLFDILGADFKNQLLSGNWDKLFAVGSESNTENMDKKPTCMNMQGMNSDYYSASEAISESDIFSGTGTDHLLDAVVSKTKSVMKQNSDDMSCRTTLTSSTCSVPSRAYKPAMPDHIQGGMFGIPKSEGKTGAVENSMRSGCIKDDGGKCSQTSSMFGSQLSSWVENSSKLKLENSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGDSKIISKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNHPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDITRMEIFMSLVRLLDQTVKGNASSSNAGDKNMMAYQSFPQATQIPATGRPSSLQ* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1472 928 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 715 764 IPR011598 GO:0046983
Ahy8g1472 928 CDD bHLH_AtLHW_like 719 788 - -
Ahy8g1472 928 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 928 IPR043561 GO:0003700|GO:0006355
Ahy8g1472 928 MobiDBLite consensus disorder prediction 217 236 - -
Ahy8g1472 928 MobiDBLite consensus disorder prediction 705 729 - -
Ahy8g1472 928 MobiDBLite consensus disorder prediction 695 729 - -
Ahy8g1472 928 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 172 IPR025610 -
Ahy8g1472 928 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 928 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1472 Ahy-Chr8 31037982 31044154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1472 494 907 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 50.812 1.43e-113 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1472 - - gmx:100787748 1230.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0672 18 6902591 6908800 Ahy8g1472 8 31037982 31044154 hybridization
Ahy8g1472 8 31037982 31044154 Ahy13g1331 13 16025851 16032165 PCT
Ahy13g1331 13 16025851 16032165 Ahy8g1472 8 31037982 31044154 PCT