Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1458 ATGTCGAAGAAGGAATGCCCCCATCATGACGACGACGATAACCACCAGCTCCACCGCCAAATACTCGCCGGAATCCTCGGATTCATCTTCCTCGTACTCCTCGTGATCTTCCTCATATGGATCATCCTTCGTCCAACCAAGCCACGCTTCATTCTCCAAGACGCCACCGTCTACACCTTCAACTTCTCCACCACCGGCGCCGCCATACCAACCCCGAACACCCTCACCACCACCATGCAAGTAACCCTCACATCCTTCAATCCAAACCAGCGCATAGGCATATACTACACCAAGCTCGACGTCTATGCCTCCTACCGCGGCCAGCAGATCTCCCTCGCCACCCAGCTTCCGCCGTCCTACCAGGGCCATCGTGACGTCACTGTTTGGTCGCCGTTTCTGTACGGTAACGCCGTGCCTGTGTCGCCGTTTCTGTTGGAGCCGTTGCAGCAGGACCAGAATGCTGGTGATGTGCTGGTCAACGTTAAGGTCAACGGAAGGGTTAAGTGGAAGGTGGGGACGTGGGTCTCCGGGAGGTACCACGTGTACGCCAACTGCCCGGCATACATCAAGTTCGTCGGCGGCGACCGGGATAATGCCGTCGGAGCTTCGGCTCCGGAGGTGAAGCTGGCAAGTCCGGGGTTAAAGCTTTCACTTGTGCAGAGTTGCAACGTTGATGTTTAA 681 0.5653 MSKKECPHHDDDDNHQLHRQILAGILGFIFLVLLVIFLIWIILRPTKPRFILQDATVYTFNFSTTGAAIPTPNTLTTTMQVTLTSFNPNQRIGIYYTKLDVYASYRGQQISLATQLPPSYQGHRDVTVWSPFLYGNAVPVSPFLLEPLQQDQNAGDVLVNVKVNGRVKWKVGTWVSGRYHVYANCPAYIKFVGGDRDNAVGASAPEVKLASPGLKLSLVQSCNVDV* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1458 226 Pfam Late embryogenesis abundant protein 82 181 IPR004864 -
Ahy8g1458 226 PANTHER OS05G0367900 PROTEIN 12 226 IPR044839 GO:0098542
Ahy8g1458 226 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 12 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1458 Ahy-Chr8 30940711 30941859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1458 22 185 EF-hand Containing Proteins AT5G21130 22.156 1.89e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1458 - - pvu:PHAVU_005G120900g 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0655 18 6720466 6721665 Ahy8g1458 8 30940711 30941859 hybridization
Ahy8g1458 8 30940711 30941859 Ahy13g1321 13 15768888 15770156 PCT
Ahy13g1321 13 15768888 15770156 Ahy8g1458 8 30940711 30941859 PCT