Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1437 ATGCTCCAAACTGTGTCTCACTGTCGTTGCTTCTCTTCTTCGCGTGGAGTCTCGCAGTCAAAGCGACTACCTTTCGTCGTGTCTCAAGTCTCTAGTCTCTGCTTCAACCCTCTCAGGTCTCAGGTCTCAAGTCTCTTCTTCTCTGCTTCAAGCCTTCAAGCCTCTCAGATCCCCAACAACCGCCGCAAAATGACTCGCCAAGGAGCTTATAAAGAAAGCGATGACATGCTCATTGATGAACCAAAACTGCCTCAGCAAGGCCAAATCGCGGCCCTTCCTAATGAGTTCAACCCCAGTTATCTGAAAATATATTACAGTAAGCTGTTTCCTCATGCTGATTTATATAGATGGATGTCATACGGCAACGATGGGAAGCATCCTGCTTGTGATTCATCTTACTTGGGACGAAGGGAATTCTCGTACACCCTAGATAACGATATATTTGTGCGCTACAATACCTTCAATAGTGCCACCGAACTTGAAAACTCCATCAAAGACAAGTGCCCGTTAAAGATAGATATTGGACCCATCTACAACCTCAACCCTGCACATAGGAATGCTTATGCTGGAGATAATGTTCTCACTCCGGTTGAGAGGGAGCTGATTTTTGATATAGATATGTCAGATTATGATGATGTTAGATACTGCTGCTCAGGTGCTGATGTTTGTCTCAATTGCTGGCCATTAATGACTGTAGCTGTCAAAGTAATAGATACTTCCTTAAGAGATGACTTTGGGTTTAGACATATTCTCTGGGTATATAGTGGTCGGCGTGGTGTACATTGTTGGGTCTGTGATAGAAAGGCAAGACGGTTGACTAATGAGCAGAGAGCAGCAGTTGCGGACTATTTTCGTGTCTACAAGGGAAATGAAAATAACTATAAGAAGGTTTCCTTGATGGGTCAAGTTCTGCATCCCTTTCTGGCGAGATCATATACTGAAGTTCTCAAGGAATATTTTGAGACAAAACTGCTTACAAGTCAAAATTTACTTTCTAGCGAGGAGAGATATGAAAAGATCCTAGAGATGATTCCTGATCAATCTATTGCTTCTGAACTTCGAGGAAAGTGGCAAGAAAGTAGGCGGTCTTCTAGTGCAAAAGAAGACATCAATATTGTTCGATGGGAGCAGCTTAAACAGTTACTGCAAAAACATAAGGCACAAGGGGTGCGTAGGTGTGTTGAAGAGATTGTGTTCACCTATACATATCCTAGGCTTGATATGGAGGTTTCTAAACATATGAACCATTTGCTCAAAGCACCCTTCTGTGTGCACCCAAAAACAGGCCGTGTTTGTGTCCCCATCAACCCAAATAATTGTGAAGAATTTGATCCCACGACGGTGCCAACCCTTATCCAGCTTTTGGAAGAGCTGAATAGGGAGGGCTTGAGGTCTGATGTTGAAGGAGGTTTGTTTGATACTCTGACAATACTTAGGTTTCTTTCTGAATGGAATAAAACTTCACTTGCAAATGCCATCAAGCTCTTTAGGTCATCCTTCCTTCAGCCATTATTGAAAATTTGCAAGGAGGAAATGGAAAGCTCCTATAATGCGAAACTACAGCAGTCGAAGAATCTCCTTAGTTGGTAG 1590 0.4277 MLQTVSHCRCFSSSRGVSQSKRLPFVVSQVSSLCFNPLRSQVSSLFFSASSLQASQIPNNRRKMTRQGAYKESDDMLIDEPKLPQQGQIAALPNEFNPSYLKIYYSKLFPHADLYRWMSYGNDGKHPACDSSYLGRREFSYTLDNDIFVRYNTFNSATELENSIKDKCPLKIDIGPIYNLNPAHRNAYAGDNVLTPVERELIFDIDMSDYDDVRYCCSGADVCLNCWPLMTVAVKVIDTSLRDDFGFRHILWVYSGRRGVHCWVCDRKARRLTNEQRAAVADYFRVYKGNENNYKKVSLMGQVLHPFLARSYTEVLKEYFETKLLTSQNLLSSEERYEKILEMIPDQSIASELRGKWQESRRSSSAKEDINIVRWEQLKQLLQKHKAQGVRRCVEEIVFTYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPINPNNCEEFDPTTVPTLIQLLEELNREGLRSDVEGGLFDTLTILRFLSEWNKTSLANAIKLFRSSFLQPLLKICKEEMESSYNAKLQQSKNLLSW* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1437 529 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 102 457 IPR014052 GO:0003896|GO:0006269
Ahy8g1437 529 Gene3D DNA primase, PRIM domain 87 510 - -
Ahy8g1437 529 PANTHER DNA PRIMASE 107 529 - -
Ahy8g1437 529 Pfam DNA primase small subunit 203 436 IPR002755 GO:0003896|GO:0006269
Ahy8g1437 529 PANTHER DNA PRIMASE SMALL SUBUNIT 107 529 IPR014052 GO:0003896|GO:0006269
Ahy8g1437 529 CDD AE_Prim_S 110 445 IPR014052 GO:0003896|GO:0006269
Ahy8g1437 529 SUPERFAMILY Prim-pol domain 96 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1437 Ahy-Chr8 30689139 30696854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1437 64 529 Core DNA Replication Machinery Family AT5G41880 61.277 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1437 K02684 - tcc:18606689 715.301