Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1427 ATGTATCATCATCAAGGGAAGAACATGCACTCTTCTTCAAGAATGCCAATCCCCTCTGAGAGGCACATGTTCCTTCAAACAGGAAACGGGTCTGGTGATTCTGGACTTGTTCTCTCAACTGATGCTAAGCCACGATTGAAATGGACGCCGGATCTTCATGCCAGGTTCATAGAAGCAGTGAACCAGTTAGGTGGAGCTGACAAAGCAACTCCAAAAACAGTAATGAAACTCATGGGGATTCCAGGTCTTACTTTATATCATCTGAAGAGCCATCTGCAGAAGTACAGATTGAGCAAGAATTTGCATGGACCAAATAACACTGTAACACACAAAATCACAGCAACAAATGTGGGGGCAACAACAAGTGAAAGATCACTTTCAGAACCCAGTGGAACTCATATGAACAAGTTAAGCCTTGTCCCACAGACTAACAACAGAGATTTACATATAAGTGAGGCACTGCAGATGCAAATTGAAGTGCAGCGAAGGCTAAATGAACAACTTGAGGTACAAAGACAGTTGCAGCTTCGGATAGAGGCACAAGGAAAATACCTGCAGTCTGTGCTAGAGAAAGCTCAAGAGACACTTGGTAGACAAAATTTGGGAATGGTAGGACTTGAAGCTGCTAAAGTTCAACTATCAGAGCTGGTGTCCAAGGTCTCCTCCCAGTGCTTGAACTCGGCATTTTCAGAGCTGAAGGAACTACAAGGATTTTGCCCCCAGCAACCACAAACCAACCAGCCAAATGATTGCTCAATAGATAGTTGCCTCACATCTTGTGAAGGGTCACAGAAGGAGCAAGAGATACAGAATGGTGGGATAGGTTTAAGGCACTTAAATGGCCATGGCCATGCATTCATGGAAAGAAAGGGAGGCACAGAAGCTCCTAAATGGAGTAATGAAGTGAAAAACAACACCTTTCTAGCTCCATTAGGCAAGAATTCAGAAAGAAGTAGCTATGGTGCAGAGAGAAGCAGTGGAAACTTGTCTATGAGCATTGGACTTGAAAGGGAAACTGAGAATGGAAGCAGCATGTACACTGAGAGTCACACTCACACAGATGGTGAGTTCTGGCACAGAAACAGCAATAGGACAGAACCAAAGAATGAAGCAATGGATGGAGGAAGAGGTTCCCATGATTATAGGTTGCCTCCTCCATACTTTTCAGCAGCAAGATTGGATTTAAACTCACATGGGGATAACAATGAAGCTGCAACAACAACAACAAGCTGTAAACAACTGGACTTGAACAGATTCAGTTGGAGCTGA 1269 0.4381 MYHHQGKNMHSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGPNNTVTHKITATNVGATTSERSLSEPSGTHMNKLSLVPQTNNRDLHISEALQMQIEVQRRLNEQLEVQRQLQLRIEAQGKYLQSVLEKAQETLGRQNLGMVGLEAAKVQLSELVSKVSSQCLNSAFSELKELQGFCPQQPQTNQPNDCSIDSCLTSCEGSQKEQEIQNGGIGLRHLNGHGHAFMERKGGTEAPKWSNEVKNNTFLAPLGKNSERSSYGAERSSGNLSMSIGLERETENGSSMYTESHTHTDGEFWHRNSNRTEPKNEAMDGGRGSHDYRLPPPYFSAARLDLNSHGDNNEAATTTTSCKQLDLNRFSWS* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1427 422 MobiDBLite consensus disorder prediction 352 377 - -
Ahy8g1427 422 Pfam MYB-CC type transfactor, LHEQLE motif 149 195 IPR025756 -
Ahy8g1427 422 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 43 98 IPR006447 GO:0003677
Ahy8g1427 422 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 422 IPR044848 GO:0003700
Ahy8g1427 422 PANTHER MYB-RELATED PROTEIN 2 2 422 - -
Ahy8g1427 422 MobiDBLite consensus disorder prediction 345 380 - -
Ahy8g1427 422 Pfam Myb-like DNA-binding domain 45 96 IPR001005 -
Ahy8g1427 422 Coils Coil 151 171 - -
Ahy8g1427 422 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Ahy8g1427 422 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 100 IPR017930 -
Ahy8g1427 422 Gene3D - 42 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1427 Ahy-Chr8 30588773 30591694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1427 75 421 G2-like Transcription Factor Family AT3G04030 49.577 9.31e-89 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy8g1427 Myb_DNA-binding 3.70E-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1427 - - gmx:100810396 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0624 18 6365465 6368905 Ahy8g1427 8 30588773 30591694 hybridization