Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1388 ATGGTTCTTCAGAATGACATCGATTTGCTTAACCCTCCAGCTGAGCTTGAGAAGAGGAAACACAAGCTCAAGCGTCTTGTTCAGTCTCCTAACTCTTTCTTCACCGATGTGAAGTGCCAAGGTTGTTTCAACATTTATGTACTTAATGATGGGCACTCCCTTCTTGTAGAGCGTATTTCACTAGAACCTGGTGATCCTAGTCCGTATAGTCTACTTATATGGATTTGCAGGTTATGTGTGTGA 243 0.4239 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFTDVKCQGCFNIYVLNDGHSLLVERISLEPGDPSPYSLLIWICRLCV* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1388 80 Gene3D - 5 57 IPR023407 -
Ahy8g1388 80 PANTHER 40S RIBOSOMAL PROTEIN S27-RELATED 2 46 - -
Ahy8g1388 80 PANTHER 40S RIBOSOMAL PROTEIN S27 2 46 IPR000592 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1388 Ahy-Chr8 30051397 30053843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1388 1 48 Cytoplasmic Ribosomal Protein Gene Family AT2G45710 91.667 8.03e-28 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1388 K02978 - pop:18100591 88.5817