Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1376 ATGCCCTCTCTTAATTGCTTCAAAGTTTCAGGTGGCATCAAAGCACAAGAATTGGGGAAGCTTATCCCTTATGAGTTGACTGTGAGTCCTGGACAGGATGTGGCGAAGGCGATATGGGAGGCTTGGGGAGCAAGCAATCGGTTTGGTTGCATACTTTTTGCTTCTGGTAGTATAGCAAGAGCCATATTTGGTAGACCAAACTCAAATAGAATTCGTATATATGAGGGGAGCTTTAAGATTCTGTCAATGTCTGGACATCATATGCTGCGAGACGATGGTTCTGAAACTTCGAGTTTGAGCATCACACTGGCTGCTTCTGATGGAACTGCTTTTACTGGTACCCTCATCAACACCTTGACAGCCAATGACACTGTTCAACTTCTTCTGGGGTACTCTGAGAAAAAAGAGGGAAAGAGCACCATGGAAGGTGAAGCTGCTCCAACAAATGCCACAGCATCATCAGAGAAGAATAGAATTAACCACTCTAACTCTGCAAGTGCAAATGATGATCCTTGCATAGAGTGTACTATGGATTATGAATTCTTTGATTCTGATGAACAATATGAGTCATAA 573 0.4293 MPSLNCFKVSGGIKAQELGKLIPYELTVSPGQDVAKAIWEAWGASNRFGCILFASGSIARAIFGRPNSNRIRIYEGSFKILSMSGHHMLRDDGSETSSLSITLAASDGTAFTGTLINTLTANDTVQLLLGYSEKKEGKSTMEGEAAPTNATASSEKNRINHSNSASANDDPCIECTMDYEFFDSDEQYES* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1376 190 CDD DUF296 23 130 IPR005175 -
Ahy8g1376 190 SUPERFAMILY AF0104/ALDC/Ptd012-like 23 134 - -
Ahy8g1376 190 MobiDBLite consensus disorder prediction 144 170 - -
Ahy8g1376 190 Pfam Plants and Prokaryotes Conserved (PCC) domain 24 130 IPR005175 -
Ahy8g1376 190 ProSiteProfiles PPC domain profile profile. 18 154 IPR005175 -
Ahy8g1376 190 MobiDBLite consensus disorder prediction 136 171 - -
Ahy8g1376 190 Gene3D - 24 152 - -
Ahy8g1376 190 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 19 164 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1376 Ahy-Chr8 29901943 29904591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1376 10 130 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 34.109 9.84e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1376 - - ahf:112706866 382.489