Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1354 ATGTTTTGCCTCGATTGCAATAACCATAAAGCATCTTGCGTTCATTGCATTGCATCTTCTCATGAAAAACATCGAGTGGTTCAGATAAGGAGATCATCGTATAATGATGTTGTGAGGGTGATAGAGATTGAAAATGCATTGAACATAAGTGGGATTCAGACATATAGGATCAATGGTTTCAGGGTCCTTTTCCTTATTACAAGGCCTCTCAATCCCAAAAAGAACAAGATTTCTGCCAAAGTTGGTTTTGGATGCAACACTAACTGTGTGATGTGCACAAGGATCATCGTTCAGCCTCATGTTTTTTGCTCTTTAGAGTGCAAGCTTATGTGGACAAAGCAGAGTGAGAGTGAAAGCTTTGCAATAGAAGGAATTTCAAGAACCATGTTATCAGCAGAGGAAGAGGAAGAATTGCACAAAAAGCTTGAACCAGAAAGACTTCTTGAACGCCGACAACGGCCTTCTCCGTGTGCTCAGCCGCTGCCGCCGCCGCCGTTCAATAATGCAAATTCTAGGAAAAGAAAGGGAATACCTCGAAGGTCTCCTCTTATGTAG 555 0.4216 MFCLDCNNHKASCVHCIASSHEKHRVVQIRRSSYNDVVRVIEIENALNISGIQTYRINGFRVLFLITRPLNPKKNKISAKVGFGCNTNCVMCTRIIVQPHVFCSLECKLMWTKQSESESFAIEGISRTMLSAEEEEELHKKLEPERLLERRQRPSPCAQPLPPPPFNNANSRKRKGIPRRSPLM* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1354 184 MobiDBLite consensus disorder prediction 143 184 - -
Ahy8g1354 184 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 183 - -
Ahy8g1354 184 Pfam PLATZ transcription factor 30 109 IPR006734 -
Ahy8g1354 184 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1354 Ahy-Chr8 29679939 29681562 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Ahy8g1354 PLATZ 3.40E-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1354 - - aip:107610412 308.531