Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1351 ATGGCTATTGCTGGTGTGCATAGTGTGGCTGTGATTGACTCTACACTTCTTAGGGAGTCTCATTCTCAGTTATCAGGTAGGCGAGGGGATGGAGGAGGGAGGGGAGGTGCCCGTTCATCTTCCCTCTTGCAAATGTGGCGAGAAATCGAGGATGAACACATGGCGGGTCAAGTTCAGGGGAGGTCTGGGGAGTTGTTAATTAGGCAGAGGAGTGATGGATTGATCTCGGACCTGTCGCAGGATGATGCCTCTCGGAGAGGAGAAGGTGAAGGGCATATGATAGAAGATGCAATTTCGGGTGAGAATGAATCAGAAACATGGTCACAGTCACAAAGTCAGAATGATTCTCGTGACGATGAACACGAGGGTTTAGGCAATTCTAATTGTGAGAGCTCTTCAGATCTTGGAGAAGTTGAAAGGGAAAGAGTGAGGCAAATTTTCAGGGAATGGATGAATAGTGGTGCTGGGGATCATCGTGCATCAAATGTTCCCAGAGGAAGTGGTGGTTCAAGGAGACAGTGGCTTGGGGAAACTGAGCAGGAGAGGGTGAGTATCATTAGGGAGTGGGTACAGATGAGTAGCCAGCAGAGAGTTGTGTCTTCTAGTGAAAACAGGGAAGATCAATCTTCGGAGATCGGTAACCAAATTGAACGTGTTCGGGATGGATTCGTTGTTAATCAGCATGAGGGCCAATCTGAGCATACACGGAGGGGAATCCGTAGATTGCGTGGCCGGCAGGTTCTGCTTGATATGCTCAAGAAGGCTGAGGTGGAAAGGCAAAGAGAAGTTCAGGAGTTGTTTGAACACCGGGCTGTATCCCGTTTCCCCCACCGCAATCGCATTCAGGCATTGCTTAGAGGCAGGTTCTTGAGAAATGATAGATCAACTGATAATAACAGGTCCACTTCCATTGCGGAAAGTGAATTAGGTTTATTGAGGCAAAAACAGACTGTATCAGGTCTAAGGGAAGGATTCTTTTCCAGAAAGGACAATACTGGTTGCAGTCAAGCAACAAGCAACGTTTCCGATGCCTCATCTGACACTGATGGTGATGTTAATGCAATTGAACATGCTGGAGCCAGCAGTTCACAAACAGTCCCATCTGTACATGCTAAAAAGTCGGAGTCTAATAACGATGGAAGTGATGGAATTGGCATATCTGGCAGGGAAAACTGTTTTCAACAATCTACTTATGAGAATCTAGACTGTCAAGATTCTGGTGCTTATGCTAATGAAATTGATCAGGCATTGGCTTCAAGTGTTGAGGTTGAAGGCAGCGATAGCATTGGACAAAATGTTGTTATGGATACTGAAGATGCTTCTAGTGGCCTCACCCAACAAAGGTTGCAAATTGAAGGTAGAGATAGCAATATGCAGGTAAATGTGGTACATATTGAGCAATCTGAGCTGGGTGGTATAACCGATAATGAAAGCTACTTATCACATCACAGCAATAGTATAGAGGGCAATATTGCTGCTGATGTGGATTGGGATGTATCTGTTGCTCCAGAAGTAGAGCAACCAGAAGAGGCTATTTCTGAAAATGAAGGAAGTGACTGGCATCAAACTAGCATTGAATGGAGTAGCACTGAGGATGGTGTTGACAATAATCAACTCGGTGGCTCATCAAATGAACTACCTCCAAACACATTCGGAAATGAAGATGGAGAAAATTCTCGCCTACAGGAAGGGCCTGAAGTGTGGCAGGAGGACAGCGGCTTTCAAGAGGCTGTAGAAATTTGGTTGGGAGGACCTTCTGATCATGAAGCAGCTCCAGTTGGTAGAATTCATGGATTTTATTTTCCCGAAGATGACAATGTGTACAGTGTCGAACTCAGGGAACTGCTAAGTAGGAGAAGTGTCTCAAACCTCCTTCGCAGCAGTTTTCGTGAAAGCCTTGATCAGTTGATACAATCATACGTTGAAAGGCAGAGTCATGCTAACGTTGAGTGGGAGCTGCAAGAAACAACCACCCCTTTCTCTCCCTCGGCAGCACAGGAGCTTGAGCAACAGAACAGGGATCCGATTGTTGGTACTCAGGATGCTGTTAATAGCTCACTTGGTCGTCAACCCTTGCCGCCGCCACCTCCGCCACCGCCGATATGGGATCACCGCCGCTCACGTCATGACAGATGGTCACCTCATGATATAAATAATCAACGCCTAGGAATGGAATGGGATGTCATTAATGACTTGAGAGTTGACATGGTTAGGCTACAGCAAAGAATGAACAATATGCAGAGAATGCTGGAGACCTGCATGGATATGCAGCTTGAGTTGCAACGCTCAATAAGACAAGAGGTTTCTGCGGCCCTAAATCGCTCAACTGGTTCATCAGGAACACGTGACCATGATTCACCAGATGATAAATCCAAATGGGAATGCGTGAGGAAAGGGGTTTGCTGCATTTGCTGCGAAAGCAATATTGATTCTCTCTTGTACAGATGTGGACATATGTGCACATGTTCTAACTGTGCTAATGATTTGCACCGAAGTGGAAGGAAGTGTCCAATGTGTCAAGCACCAGTTGTTGAAGTAATTCGTGCTTATTCCATACTATAG 2562 0.459 MAIAGVHSVAVIDSTLLRESHSQLSGRRGDGGGRGGARSSSLLQMWREIEDEHMAGQVQGRSGELLIRQRSDGLISDLSQDDASRRGEGEGHMIEDAISGENESETWSQSQSQNDSRDDEHEGLGNSNCESSSDLGEVERERVRQIFREWMNSGAGDHRASNVPRGSGGSRRQWLGETEQERVSIIREWVQMSSQQRVVSSSENREDQSSEIGNQIERVRDGFVVNQHEGQSEHTRRGIRRLRGRQVLLDMLKKAEVERQREVQELFEHRAVSRFPHRNRIQALLRGRFLRNDRSTDNNRSTSIAESELGLLRQKQTVSGLREGFFSRKDNTGCSQATSNVSDASSDTDGDVNAIEHAGASSSQTVPSVHAKKSESNNDGSDGIGISGRENCFQQSTYENLDCQDSGAYANEIDQALASSVEVEGSDSIGQNVVMDTEDASSGLTQQRLQIEGRDSNMQVNVVHIEQSELGGITDNESYLSHHSNSIEGNIAADVDWDVSVAPEVEQPEEAISENEGSDWHQTSIEWSSTEDGVDNNQLGGSSNELPPNTFGNEDGENSRLQEGPEVWQEDSGFQEAVEIWLGGPSDHEAAPVGRIHGFYFPEDDNVYSVELRELLSRRSVSNLLRSSFRESLDQLIQSYVERQSHANVEWELQETTTPFSPSAAQELEQQNRDPIVGTQDAVNSSLGRQPLPPPPPPPPIWDHRRSRHDRWSPHDINNQRLGMEWDVINDLRVDMVRLQQRMNNMQRMLETCMDMQLELQRSIRQEVSAALNRSTGSSGTRDHDSPDDKSKWECVRKGVCCICCESNIDSLLYRCGHMCTCSNCANDLHRSGRKCPMCQAPVVEVIRAYSIL* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1351 853 MobiDBLite consensus disorder prediction 97 138 - -
Ahy8g1351 853 PANTHER PROTEIN, PUTATIVE-RELATED 1 852 - -
Ahy8g1351 853 MobiDBLite consensus disorder prediction 357 388 - -
Ahy8g1351 853 MobiDBLite consensus disorder prediction 332 349 - -
Ahy8g1351 853 Pfam Zinc finger, C3HC4 type (RING finger) 799 845 - -
Ahy8g1351 853 MobiDBLite consensus disorder prediction 20 39 - -
Ahy8g1351 853 MobiDBLite consensus disorder prediction 770 790 - -
Ahy8g1351 853 MobiDBLite consensus disorder prediction 530 557 - -
Ahy8g1351 853 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 778 851 IPR013083 -
Ahy8g1351 853 MobiDBLite consensus disorder prediction 332 388 - -
Ahy8g1351 853 SUPERFAMILY RING/U-box 800 846 - -
Ahy8g1351 853 MobiDBLite consensus disorder prediction 153 176 - -
Ahy8g1351 853 MobiDBLite consensus disorder prediction 681 702 - -
Ahy8g1351 853 ProSiteProfiles Zinc finger RING-type profile. 801 840 IPR001841 -
Ahy8g1351 853 Coils Coil 729 756 - -
Ahy8g1351 853 MobiDBLite consensus disorder prediction 530 565 - -
Ahy8g1351 853 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 852 - -
Ahy8g1351 853 CDD mRING-HC-C3HC5_NEU1 801 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1351 Ahy-Chr8 29653668 29659001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1351 801 847 C3H Transcription Factor Family AT3G06140 38.298 1.18e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1351 - - vun:114184870 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0546 18 5331313 5336672 Ahy8g1351 8 29653668 29659001 hybridization
Ahy8g1351 8 29653668 29659001 Ahy13g0268 13 2743891 2748900 PCT
Ahy13g0268 13 2743891 2748900 Ahy8g1351 8 29653668 29659001 PCT