Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1350 ATGGCGAAGGGTACGGATTCCAACGAGTTCATGATGCTTTCTAGGGTACGGACGGGTCTCAAGAGGGAATTTGCATTCGCCATGAAGGCCCAATCGGAGATCGGTGGCGGTTCCTTGGGCCGCACCCGTGCCAGCAAGAACCAGAATGTGCCTCCGGCTCAGCCCAGTCCCGCCAGAAAGCGCCAAAGGAAGTCATGTTCCGTGGAGGAAGAGGCGCCGGCGACGAAGAATGAAGTTCAAGAGGAGGTTGATGGGTACACGGCAGATGTGGCGGGTGTGGCGACAGCGAAGATTGATTCGGAGGAGGCTGGCGACGCCGTGAGCGAGGAGGAAGCGAAGAGCGACGTGGTGGATATCAACAGCGACGACGAGCCGAAGAATAATCAGGTTGGGGAATCATTGTTGGAGGAGAAGAAGATAGAGGAGGGAGAGGTTGACGAACCAAAGGGTGATATGGTGCTGGAGACTGTGATCAATGAGGAACCCATCAATGAAGAAGAGCCTCGTGTGGTTGTGGATGAAATTGAGAATAAAGAGGAGCAAGTTTCTCCTGAGGATAAAAGTGCACCTTTGGAAAAACGTGCTTCTGGGGAACACGGTGCAGTTGGGATAACAACACCACTTTTGGTTTGCAGTGACGATGATAAGGGGAAGAGAGTTGTAGCTGTGGAGAAGCCTATGAGGAGGTTTACTAGGTCGGTATTGAAGCAAAAAACTGAGAATACCAATATGGTGAATGATGGGGAAGGTGATGCTATTGTTGTTATAGGTGTTGGAGCTGCTGATGATAATGTTCAGAATGAAACTGAGGTTGTGACTGAAACTGATGCTTCACCACAGTTCACAACTCCAACTCCAGCAAAGGGATCAAGGAGGGGCATGAAGAGGTTCCCTACCAAGCTGAAGGACCTTCTCGCCACCGGGATTCTTGAGGGACTGCAAGTGAAGTATGTCAGGGGATTGAAGGCACGGAGGCCTGGAGAAGCAGGGCTTCAAGGAGTCATTCGTGACTCGGGGGTTTTGTGCTATTGTCCGGATTGTAAAGGGAACAAGGTTGTCACACCCACTGTGTTTGAGCTGCATGCTGGTAGTGCGAACAAACGACCTCCTGAGTATATGTACCTTGAGAATGGGAATACTCTCCGTGACATCATGAATGCATGCTGGAATTTTCCTTTGGACACCATGGAAGAAGCTGTCCAAAAGGTCCTTGGTGGTTTCACTTTGAAGAAGTCTAACATCTGTTTTAATTGCAGAGGTGGCAATGGTTCATCAAGACTACTACTATGTGATTCGTGCATGGAGTTGAAAGACACTCAACCTAGCCATCGTCAAACAAAAAGTGTTGATCAAAATACCGTGACTAGCACTAGAAGTGTTGCCCAAACTCCTATGACTAGCACTAAAAGTGTTGGCCAAACTCCTCTGACTAGCACTAAAAGTGTTGCCCAAACTCCTGTGACTAGCACTAAAATTGTTGCCCAAACTCCTGTGACTGGCAGTAAAACTGTTTCTCAAACCACCATGACTAGCACTACAGTTGTTTCATTTGCAGTTCAACCCAGATCACCAGAACCACAATCAGAACCAGAGCCAGTTGCAGTTCCAAAGTCCTTAAACAATGGAATGAAGCATAGCACATCTCATGGCAGGAGCCAGGGAAGAATTACTAGAAAGGATCTACGGTTGCATAAGTTGGTATTCGAGGAAGACGTGCTGGCAGATGGAACTGAACTAGCGTACTATGCTCATGGAGAGAAAAAGCTGGTAGGTTACAAGAAGGGATATGGAATTTTTTGTACCTGCTGCAAATCTGAGGTCAGTGCCTCTCAGTTTGAAGCCCATGCTGGCTTGGCATCTCGACGCAAGCCTTACTTGCACATATACACACCTGATGGAGTTTCACTCCATGATTTGTCCATCTCTTTATCAAAAGATCGGAGGTTTGCTATCAGTGAAAATGATGACCTCTGCAGCATTTGTGAAGATGGAGGGGATCTTTTGTGCTGTGATGGATGTCCAAGAGCTTTTCACATAGATTGTGTTCCTCTTCCATGCATTCCAACTGGTACTTGGTATTGTAAATATTGTCAGAATCTTTATGGGGAGCATAATGTGAATGCGCAAGCAAAAGACCGAAGATGTGTACGTGTTGTCAAAACTAACAAGGTTGACCATGGTGGATGTGCCTTATGCAGACTTCACTATTTCAGTAAAAGTTTTGGTCCTCGGACAGTAATCATTTGTGATCAGTGTGAAAAAGAATATCACGTTGGGTGCTTGAAGGAACATAACATACAAAACCTTGAGGAATTACCTGAAGGGAATTGGTTTTGTGGTACAAGTTGTGGTCAAATTCATTCTGCTCTTGTGAATTTGGTGGCTAGTGGAGAGAATAGCCTCCCAGATTCCCTTTTAAGTTTGATTAAAAGGAAACATGAAGAGAAAGGTTTAGATGCTGTGGATGGTCTCGATATTAAATGGAGGCTTCTGAACTGGAAGCGTGCTGCTTCTGTTGACACTAGAAAATTGCTTTCAAAGGCTGTTGCCATCTTCCATGAGAGGTTTGATCCTATAGTCGATTCTAGTTCTGGCCGTGATTTTATTCCAACCATGCTATTTGGAAGGAACATCCGGGGTCAAGATTTTGGTGGAATGTACTGTGCGGTGCTTACTGTCAACCAAGTTGTTGTCTCTGCTGGCATATTTCGTGTCTTCGGGCTAGAAGTAGCAGAGCTTCCACTAGTGGCAACAGTAGCAGATTTCCAAGGAAAGGGTTACTTTCAGTGCCTATTTTCTTGCATGGAGAGGCTGCTTGCATCTCTGAATGTGAAACACCTTGTTTTGCCCGCTGCTGAAGAAGCCGAATCAATATGGACAAGTAAATTTGGGTTTACAAAACTGGAACAAGAGGAGATAAACAACTATAAGAAATTTTATCGCATGATGATCTTTCAAGGGACTTCATTACTACATAAGCCGGTTCCTATGCCTGAACAGAACTAA 3006 0.4574 MAKGTDSNEFMMLSRVRTGLKREFAFAMKAQSEIGGGSLGRTRASKNQNVPPAQPSPARKRQRKSCSVEEEAPATKNEVQEEVDGYTADVAGVATAKIDSEEAGDAVSEEEAKSDVVDINSDDEPKNNQVGESLLEEKKIEEGEVDEPKGDMVLETVINEEPINEEEPRVVVDEIENKEEQVSPEDKSAPLEKRASGEHGAVGITTPLLVCSDDDKGKRVVAVEKPMRRFTRSVLKQKTENTNMVNDGEGDAIVVIGVGAADDNVQNETEVVTETDASPQFTTPTPAKGSRRGMKRFPTKLKDLLATGILEGLQVKYVRGLKARRPGEAGLQGVIRDSGVLCYCPDCKGNKVVTPTVFELHAGSANKRPPEYMYLENGNTLRDIMNACWNFPLDTMEEAVQKVLGGFTLKKSNICFNCRGGNGSSRLLLCDSCMELKDTQPSHRQTKSVDQNTVTSTRSVAQTPMTSTKSVGQTPLTSTKSVAQTPVTSTKIVAQTPVTGSKTVSQTTMTSTTVVSFAVQPRSPEPQSEPEPVAVPKSLNNGMKHSTSHGRSQGRITRKDLRLHKLVFEEDVLADGTELAYYAHGEKKLVGYKKGYGIFCTCCKSEVSASQFEAHAGLASRRKPYLHIYTPDGVSLHDLSISLSKDRRFAISENDDLCSICEDGGDLLCCDGCPRAFHIDCVPLPCIPTGTWYCKYCQNLYGEHNVNAQAKDRRCVRVVKTNKVDHGGCALCRLHYFSKSFGPRTVIICDQCEKEYHVGCLKEHNIQNLEELPEGNWFCGTSCGQIHSALVNLVASGENSLPDSLLSLIKRKHEEKGLDAVDGLDIKWRLLNWKRAASVDTRKLLSKAVAIFHERFDPIVDSSSGRDFIPTMLFGRNIRGQDFGGMYCAVLTVNQVVVSAGIFRVFGLEVAELPLVATVADFQGKGYFQCLFSCMERLLASLNVKHLVLPAAEEAESIWTSKFGFTKLEQEEINNYKKFYRMMIFQGTSLLHKPVPMPEQN* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1350 1001 MobiDBLite consensus disorder prediction 519 555 - -
Ahy8g1350 1001 Pfam PHD-finger 658 699 IPR019787 -
Ahy8g1350 1001 MobiDBLite consensus disorder prediction 440 482 - -
Ahy8g1350 1001 MobiDBLite consensus disorder prediction 41 55 - -
Ahy8g1350 1001 MobiDBLite consensus disorder prediction 177 194 - -
Ahy8g1350 1001 SMART PHD_3 657 698 IPR001965 -
Ahy8g1350 1001 SMART PHD_3 728 783 IPR001965 -
Ahy8g1350 1001 CDD PHD1_AIRE 657 697 - -
Ahy8g1350 1001 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 651 719 IPR013083 -
Ahy8g1350 1001 SUPERFAMILY FYVE/PHD zinc finger 726 780 IPR011011 -
Ahy8g1350 1001 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 881 974 IPR016181 -
Ahy8g1350 1001 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 723 786 IPR013083 -
Ahy8g1350 1001 MobiDBLite consensus disorder prediction 177 197 - -
Ahy8g1350 1001 MobiDBLite consensus disorder prediction 62 78 - -
Ahy8g1350 1001 ProSitePatterns Zinc finger PHD-type signature. 658 697 IPR019786 -
Ahy8g1350 1001 MobiDBLite consensus disorder prediction 274 294 - -
Ahy8g1350 1001 Pfam Tify domain binding domain 333 388 IPR032308 -
Ahy8g1350 1001 Pfam Tify domain binding domain 591 639 IPR032308 -
Ahy8g1350 1001 PANTHER AUTOIMMUNE REGULATOR 1 994 - -
Ahy8g1350 1001 PANTHER AUTOIMMUNE REGULATOR 1 994 - -
Ahy8g1350 1001 MobiDBLite consensus disorder prediction 445 482 - -
Ahy8g1350 1001 Gene3D - 825 993 - -
Ahy8g1350 1001 MobiDBLite consensus disorder prediction 32 141 - -
Ahy8g1350 1001 MobiDBLite consensus disorder prediction 107 122 - -
Ahy8g1350 1001 ProSiteProfiles Zinc finger PHD-type profile. 655 700 IPR019787 -
Ahy8g1350 1001 SUPERFAMILY FYVE/PHD zinc finger 651 700 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1350 Ahy-Chr8 29626362 29633329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1350 298 995 PHD Transcription Factor Family AT2G36720 45.455 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy8g1350 TDBD 2.30E-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1350 - - gmx:100803825 1118.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0544 18 5295973 5302899 Ahy8g1350 8 29626362 29633329 hybridization
Ahy8g1350 8 29626362 29633329 Ahy13g0269 13 2768037 2773967 PCT
Ahy13g0269 13 2768037 2773967 Ahy8g1350 8 29626362 29633329 PCT