Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1323 ATGACTTCAATGAAGAATGAGAATGAGAGCAGTGTTCCATATTCTTCTTCTCCTTTGTCTGCCCAAAACCAAAGACCCATGGAAATTGCACCCATGGCAGCAGCCAACAACAACGCAATCAGCACCGCCATGTCCAGCAGACGCAGGAAGGACCGCCACATCAAGGTGGAAGGCCGAGACCGTCGTGTCCGCCTGTCCATCGCATGCGCCGCCTTTGTCTTCCAACTCACTCGCGAGCTCAACAACAAGAGCGACGGCGAGACTATTGAGTGGCTCCTCCGCCAAGCAGAGCCCTCCATTATCGCCGCCACCGGCCACGGTGTTCCACCCATCATCGGTAACCCCCCAGCCCCAGCGGCACCAGGAGATAACCCCATTCCCATTTCTCATTCAGTTCCGGTTTCTGCTTCTGCCTCTGCCTCTGCTTCTACTGCAGTTGCACCACCACCAAGCGAGGAAAACGAGTTTGTCGATGAGGGTGCAATAGATGAGCCATGTTTTTCAACCATGGATGATTTTGATTTGCTTGGCAACCCTATCGACTGGGATTTCAATTTGATGTAA 564 0.5301 MTSMKNENESSVPYSSSPLSAQNQRPMEIAPMAAANNNAISTAMSSRRRKDRHIKVEGRDRRVRLSIACAAFVFQLTRELNNKSDGETIEWLLRQAEPSIIAATGHGVPPIIGNPPAPAAPGDNPIPISHSVPVSASASASASTAVAPPPSEENEFVDEGAIDEPCFSTMDDFDLLGNPIDWDFNLM* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1323 187 MobiDBLite consensus disorder prediction 1 24 - -
Ahy8g1323 187 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 23 117 - -
Ahy8g1323 187 MobiDBLite consensus disorder prediction 1 26 - -
Ahy8g1323 187 MobiDBLite consensus disorder prediction 114 133 - -
Ahy8g1323 187 Pfam TCP family transcription factor 48 118 IPR017887 -
Ahy8g1323 187 ProSiteProfiles TCP domain profile. 49 103 IPR017887 -
Ahy8g1323 187 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 117 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1323 Ahy-Chr8 29169368 29169931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1323 50 110 TCP Transcription Factor Family AT5G23280 77.049 1.30e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy8g1323 TCP 1.30E-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1323 - K16221 aip:107610427 294.664