Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1312 ATGGCAAATAGTACATGTTCTAGCTCAAGTTCAATGAATTCAAAACAGAAGCCAATAAAAGAAAAGAGTGTGAAACAATTGACATTTGAAGCTAAGGAAGTCAATGACAATGAAGAGCACGATTTGGGAACTTCACACTTAGAAACAAAGAGAATGGATGCTCGTTGGTACCGGTCTCTGTTTCGAAAACCAAAAAATGGTAAGGTTGAGGTGCCTCAAAGGGTTCAACCTGATATCTTTAGAAACGAGACAGCACAAATGCCAGAGTCAAGGAATCCATTACTGGATGAAGATTTAGTTAGGAAGGATGTTGGGCATGATGGAGAAAAATCGACTCATTCTAAGAGAAATGGAATCATGTTGGACACGGGTTCAGATCTTTCTACCACATTGGCTGATGATGATGATTGCAACCTCATCCCTTCAAGGTTGCGTGACAATATTGTAGGGACTGGTGGGTCATGTTCCAAACGGAGAAGGTTGGATTGTGATCCTGTGGTCTCATCTAACCCTTCTACAACTGAGGATGGAGTTGATACTGATGCAAGTGTGTTGCAAAAGGAATATCCTGTAAATTCACCAAAAGAAGTCACAAAGCACACCTGTCTAATTTGCAAGAGTGGTGGACAGCTACTGTTTTGTGGTGGAAAAGGATGCAGCGGGTGCTACCATTCTTCTTGTCTTGAGCCACCCCTGGTCGATGCCTCCATTGGAGTTTGGTATTGCCATTTCTGTGTGAGGAAGAAGATTGAACTTGGTGTATATTCTGTATCGGAGGGAGTAGAATCAATTTGGGATGTCAAAGAAGTTTTGACATCAAATTCTGATGGGTCTACTCTTGCTCGGAAAGAATATCTAGTGAAATATAAAGGCGTTGCTCATGTTCATAATCGATGGATACCAGAAAATCAGTTACTTCGTGAAGCTCCTTCACTTCTTAAAAACTTTAATATGAAAAATCAGGACCGAAGGTTGAAGCTAGAATGGAGTCTACCTGATCGTCTGCTGCAGAAGAGAGCAATAATCCATTCCACACAGCAAGATGATCACAACATTAATGATGGAGTTCAAAACTTAAACTGTTGCTACGAATGGCTTGTGAAATGGCGTGGTCTTGGTTATGAGCATGCTACATGGGAGTTGGACAATGAGTTGTTTCTTCGTTCACCTGAAGGTCAGAGGTTAATCAGAGGCTATGAAGAGTGTTTCCAGAGAGCAAAGAGAGCAGCTTCTTGCTCCAGAGTAGATAATGTGCCACAGATTGATCAACTCAAGGAGCGGCCGTCAAGTCATATTGCATATAAGTGCAAGTCGGACTCTTTCAAGTTTATTGAGTATTGGGTTCCTGTCCAGATATCTCATGTGCAGCTTGAGCAGTATTGTGCTACTTTACATTCAAATGCTTCAATTCTTCGTTCATCAGCAAAGACGGATATCGATGCCCTTCGTGACATTATTATTACGGCCCGAAAGTGTTGTATTCATCCTTCTATTGTTGATCAAACACTGAAAAGTCGACTTACTGTTGGTCTTGATGAGGCTGAATTCATCGATGTTGATATAAAAGCAAGTGGCAAGCTGCAACTACTTGATTCGATGCTCATGGAGTTGAAGGCTAAAAGCTTAAGGGGTCTGATTCTTTTTAAGTCTATTGGTGGTTCTGGGAGGGTTTCTGCAGGAGATTTTTTGGATGACTTGTTACGGATAAGATTTGGTCCAAACTCGTATGAACGGGTTGACAAAGGTCTTTTAGTGTCCAAGCAGAAAGATGCCATGAGGAAATTTAACAACAAGGATGATGGACGGTTTGTTTTTCTGTTAGATGCATGTGCCTGCCGTCCAGGCATCAGATTATCATCACTGGATACTATTATTATATTTGACAGTGATTGGAACCCAACTAATGATATAAGATCCCTTCAGAAGATAACAATTGATTCACAGCCCCAAGTGATAAAAATATTCCGCTTATATTCAGCCTTCACTGTGGAAGAAAATGCCTTGATCCTTTCAAAGCAAGATAGGATACTTGACAGCAATTTACTGAACATAAGCAGGACTACCTGCCAAATGCTGTTGATGTGGGGAGCTGGTTCCCTATTTGATGATTTGAAAATTTTCCATCACAGTGAAACTTCTGTTTTGGGTCAGAAATCTTCATCTGGGCAACAACATCTGACAGAAACAGTCCGTGAATTATCATCAGTACTATCTCAGGACGTTGAAACAAGAAACTGTTCAGTTTTATTAAAAGTCAGGCAAAATGGGTCAACATACCGGGCAGATTTTCCTTTGCCTGGTGAGATGAAAAATAAGATACTGGAGGAAGAGCTTCCCCATATTTTTTGGACAAAACTTTTTGAGGGGAAACAGTTTAAGTGGAAGTACTCTTGTAGTTCATCTCAGCGGAGCCGAAAGAGAGTAGATCTTTTTGATGGTAGTGGAGGTATATCAAAAAAGCGCCGGAAAGTGAAAAGCAATCTTATGGACCAGCCTTCTTCAAAATCTGAAGGTTTTAAGTTATCTACTGGGATCAAGACAGATAGACTTGGATTTGATGATGTCGAACATGAGGAAACAACTAGACTGCGTGATGAGCAGAGGAGCTTATATCTTTCTCTGAAGCCAGAGATCAAAAAGCTTTGTGGTGTTCTTCTTCTCCCTGATAACGTCAGAGATATGGTTGATAATTTTCTTGAATTTGTTGTGAACAATCATCATGTCAACAGGGAGCGAGAACCAGTATCAATGTTACAGGCTTTTCAAATATCTTTGATTTGGACTGTTGCTCCATTGCTAAAGCACAAAGTTGACCACAGGGATTCTCTTTTACTTGCAAAACAGCATTTGGATTTTGTCTGTAGGAAAGAAGAGGTGGATTATATCTACTCAGTTTTACGCTGTCTGAAGGGACTTTTTTTACATCGGATGGGAAATTCAAAGGATACTGGTTCTCCAAAATCTCCCGAGTCATCAAGGAAGGTTTATTCCAATAAAGAAGTAGCACAAGAGGTTGACTTGTTTAAAAATGATGTGTTCAGAAGTATTAGGGAAATACGGAAGAAGTGCCAAGAGCAGTTGAAGAAACTTAAACGGCTGCAACAAGAAGAGAAGGAAAGATTAGAAACAGCTTTTGAGGATGAAAAGGCTGAATTTGAGAAAAAGTACAAAATAGAGTCATTGGTTATTCGGACCTGCTCTCCAAATGATGTGATGAAGACAGAGAAGCTCAAAGTCTTGAACACTGAATTTGGTTCAAAAATTGAAGAACTAAAATGTGAGCATGAAACACGTCTAAAGGCTCTTGAGGACACACATATGGCTGCTAGGCAGAACTTCAAACATAGAGAAGATGCATGGGCACAAGATGTAGAGGATTGGGCAAAAAGTGAATTGTCAAACATAGATGCTTCAAAGGAACTTGGGACGGCAGTTGAATACACGCAGCTGTCTGATCAGGAAAATGCTCACAAGGGTTCAGAGAGTATGCCCCTTGTGTCTGATCATTTGACTGATGAGAAGGGTCATGATAATAACACAAATGAGGCCATGCCTAATGATGTTCAGGATGAAGTTCATTCTTCTACACACAATAAACTAGATGGGACTGTTTCAAGCCTGTCTTGTGAGAATGCCGTGCAAACTCATGGAGCTTATAATGGTTTGGATAATGCTACCACTGAAACTTCACATTTACCTAATGAAGGGATTGCTGATGGGGCCATGGCAGGCATAGTGAATAGAGATGCACCCAGAAAGCCTACCACCGTCACTGCTACTGATTGTCTGGAAAATGTTTCAGCTGATAGTCCTCCTCCATCTGTGGAGCAAGTAACTGATGGAGTTGCTTTAAATGAAATTTTAGATAGATGTGCCACCCCAGAAACTAGCCACGATCAGGGCAGAGTAAGCATATTGGGACGAGAGGTACCTGTGGAAGTGGAAACACATAGGATGGTCAATTTTAGTGAATGTCCCGTAAATGCTGCTGCTGTCAATCATTTCTCATCTGTGGATCAAACATCTGACAAAGGACCTATAAATGACCCAGATAGTACTGTCTCATCATTCAGGTGTTGTCAAGCTGATGGTCCTGATAAAAGTTCCCTTTCAAATCCACCTTTGGTACAACAATTTACTGATGTAGTCTCTTTGAATGAACCTGATGGAGATACTCATGAAGCGGCTGATTGTCATAATGATACAAGGCCTTCCACAGACACTTCTTCAGTGGATAAAAGTAGTATGATACCAGCCCAGCTGGAAGGAGTGCAGCAATCACCATCTCTGGAGGCCCCTCCTGCTCAGGATACTGCTGGAGAAGTGCAGAATTCTTCTGAAAGAGCTGAACTAGTACCTAATCTAGTTGGTGTTGTTCCAGCTAATCAATCAAATTCATGCATCCTGGAGCCTTCCGAGAATGGAGTTGAACATCAGCCGAACAGAAATGATCTCCCCCACCACGAAACAGAGGTTTCAGCTGTGGTTCCTAATCAGGATGTTGTGCAGGCTGACTCAAATTTAGAGCTTGGTTCACACTCGCAAGCAGTTGTGCACTCTGTCCTAAATTCAGGCCATGATTCACTTGGGCCAGTTGGAGTCATAAGAGAGGCTTCAAGTTCAAGCTTGAGAAATTTGTCAACTCCTTCAGAAATCAACAATCATCCTATACATACTGCAACTCATTCAGCTTCTAGAATGCCTCTGCCGTTGAGCGCCGATCCACTTAAAAATGAATTGGAAAGAATAAAAAAAATTATTGAACAACTGACCAAAAACCATGAAGAAATGAGATCTAAACTGAAGTCTGATTTCGAAAAGGAATTGGAGGCACTTCGTAGGAAGTATGATATTAAATTTCAATTGGTTGAGAATGAATTTCAACAAACGAAGAACAGGTTGGATTCAAGTTACCACACAGTTTTGGTAAATAAGATGTTGGCAGATTTTTTTCGGTCCAAATGCATGTATCGTAAAACATCTGATGCATATGGAGTGCAGCAAGATGCAGGTGTTGCCCAGCAGTCGATTCAGCTTGCAAGACAACAAAGTGCTACTTTTCCTTCCCAGGTTGTTGCTGGTTCATCTTCCCGGGGACCACTTTCTGCCAATCTTCATAGTCCATCTGCTTTGGTTAGCTCTCAGAATTCGCTCCCACCTTCAAATGTTACTTACAAGACACCAAGTCCTCCTGCAAGACTTCCTCTTAACTGCAATTCTTCACCCTCAGGGAATTTTCCGATTGCCAGTGAGATGCGAGCCCCGGCACCACATCTCCAGCCTTTTAGACCCTCGACACCTATGCTGGCTCCTAATCACCCTGCTCTCCTTCATGGGATGCCAAATCAGGCTGCACCTATTAACATACCTGCGATTGCTCCCACATTGTCTTGTGTTCCAGCCCAACCAACTCCACTGACATATCAGTCTGATCCTCAGATGGCCCACCAGCCGAATAGCTCTGTTGGAACTGGTGGGTTTTCCACCCTTAACTTACGGACCATCAGCTTACATGCGAATGCCAACACTCAATCTACTGTTTGTCTTCCAAGAGTTCAGCCAAGTATGTCAGAAGTGGTTTCTTTGAACCCACCCAGAATTGGCACCAGTGTTAATGTGACTCCTAACTCATCCAGTCAAGCTGCATCTCTTGAATTAGTCTGTTTATCAGACGATGAGTGA 5682 0.4182 MANSTCSSSSSMNSKQKPIKEKSVKQLTFEAKEVNDNEEHDLGTSHLETKRMDARWYRSLFRKPKNGKVEVPQRVQPDIFRNETAQMPESRNPLLDEDLVRKDVGHDGEKSTHSKRNGIMLDTGSDLSTTLADDDDCNLIPSRLRDNIVGTGGSCSKRRRLDCDPVVSSNPSTTEDGVDTDASVLQKEYPVNSPKEVTKHTCLICKSGGQLLFCGGKGCSGCYHSSCLEPPLVDASIGVWYCHFCVRKKIELGVYSVSEGVESIWDVKEVLTSNSDGSTLARKEYLVKYKGVAHVHNRWIPENQLLREAPSLLKNFNMKNQDRRLKLEWSLPDRLLQKRAIIHSTQQDDHNINDGVQNLNCCYEWLVKWRGLGYEHATWELDNELFLRSPEGQRLIRGYEECFQRAKRAASCSRVDNVPQIDQLKERPSSHIAYKCKSDSFKFIEYWVPVQISHVQLEQYCATLHSNASILRSSAKTDIDALRDIIITARKCCIHPSIVDQTLKSRLTVGLDEAEFIDVDIKASGKLQLLDSMLMELKAKSLRGLILFKSIGGSGRVSAGDFLDDLLRIRFGPNSYERVDKGLLVSKQKDAMRKFNNKDDGRFVFLLDACACRPGIRLSSLDTIIIFDSDWNPTNDIRSLQKITIDSQPQVIKIFRLYSAFTVEENALILSKQDRILDSNLLNISRTTCQMLLMWGAGSLFDDLKIFHHSETSVLGQKSSSGQQHLTETVRELSSVLSQDVETRNCSVLLKVRQNGSTYRADFPLPGEMKNKILEEELPHIFWTKLFEGKQFKWKYSCSSSQRSRKRVDLFDGSGGISKKRRKVKSNLMDQPSSKSEGFKLSTGIKTDRLGFDDVEHEETTRLRDEQRSLYLSLKPEIKKLCGVLLLPDNVRDMVDNFLEFVVNNHHVNREREPVSMLQAFQISLIWTVAPLLKHKVDHRDSLLLAKQHLDFVCRKEEVDYIYSVLRCLKGLFLHRMGNSKDTGSPKSPESSRKVYSNKEVAQEVDLFKNDVFRSIREIRKKCQEQLKKLKRLQQEEKERLETAFEDEKAEFEKKYKIESLVIRTCSPNDVMKTEKLKVLNTEFGSKIEELKCEHETRLKALEDTHMAARQNFKHREDAWAQDVEDWAKSELSNIDASKELGTAVEYTQLSDQENAHKGSESMPLVSDHLTDEKGHDNNTNEAMPNDVQDEVHSSTHNKLDGTVSSLSCENAVQTHGAYNGLDNATTETSHLPNEGIADGAMAGIVNRDAPRKPTTVTATDCLENVSADSPPPSVEQVTDGVALNEILDRCATPETSHDQGRVSILGREVPVEVETHRMVNFSECPVNAAAVNHFSSVDQTSDKGPINDPDSTVSSFRCCQADGPDKSSLSNPPLVQQFTDVVSLNEPDGDTHEAADCHNDTRPSTDTSSVDKSSMIPAQLEGVQQSPSLEAPPAQDTAGEVQNSSERAELVPNLVGVVPANQSNSCILEPSENGVEHQPNRNDLPHHETEVSAVVPNQDVVQADSNLELGSHSQAVVHSVLNSGHDSLGPVGVIREASSSSLRNLSTPSEINNHPIHTATHSASRMPLPLSADPLKNELERIKKIIEQLTKNHEEMRSKLKSDFEKELEALRRKYDIKFQLVENEFQQTKNRLDSSYHTVLVNKMLADFFRSKCMYRKTSDAYGVQQDAGVAQQSIQLARQQSATFPSQVVAGSSSRGPLSANLHSPSALVSSQNSLPPSNVTYKTPSPPARLPLNCNSSPSGNFPIASEMRAPAPHLQPFRPSTPMLAPNHPALLHGMPNQAAPINIPAIAPTLSCVPAQPTPLTYQSDPQMAHQPNSSVGTGGFSTLNLRTISLHANANTQSTVCLPRVQPSMSEVVSLNPPRIGTSVNVTPNSSSQAASLELVCLSDDE* 1894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1312 1893 Gene3D - 444 678 IPR027417 -
Ahy8g1312 1893 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 529 693 IPR001650 -
Ahy8g1312 1893 ProSiteProfiles Chromo and chromo shadow domain profile. 265 328 IPR000953 -
Ahy8g1312 1893 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 194 252 IPR013083 -
Ahy8g1312 1893 Coils Coil 1573 1607 - -
Ahy8g1312 1893 MobiDBLite consensus disorder prediction 1690 1728 - -
Ahy8g1312 1893 MobiDBLite consensus disorder prediction 1690 1723 - -
Ahy8g1312 1893 MobiDBLite consensus disorder prediction 103 122 - -
Ahy8g1312 1893 Pfam Chromo (CHRromatin Organisation MOdifier) domain 265 317 IPR023780 -
Ahy8g1312 1893 Pfam Chromo (CHRromatin Organisation MOdifier) domain 349 385 IPR023780 -
Ahy8g1312 1893 MobiDBLite consensus disorder prediction 1425 1446 - -
Ahy8g1312 1893 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 443 683 IPR027417 -
Ahy8g1312 1893 SUPERFAMILY Chromo domain-like 218 323 IPR016197 -
Ahy8g1312 1893 MobiDBLite consensus disorder prediction 1 22 - -
Ahy8g1312 1893 Gene3D - 418 443 IPR038718 -
Ahy8g1312 1893 MobiDBLite consensus disorder prediction 1 17 - -
Ahy8g1312 1893 SMART chromo_7 258 321 IPR000953 -
Ahy8g1312 1893 SMART chromo_7 328 404 IPR000953 -
Ahy8g1312 1893 ProSiteProfiles Chromo and chromo shadow domain profile. 336 401 IPR000953 -
Ahy8g1312 1893 SUPERFAMILY FYVE/PHD zinc finger 190 249 IPR011011 -
Ahy8g1312 1893 Gene3D - 331 399 - -
Ahy8g1312 1893 MobiDBLite consensus disorder prediction 1153 1203 - -
Ahy8g1312 1893 Gene3D - 1573 1654 - -
Ahy8g1312 1893 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 7 405 - -
Ahy8g1312 1893 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 419 1854 - -
Ahy8g1312 1893 ProSitePatterns Zinc finger PHD-type signature. 202 245 IPR019786 -
Ahy8g1312 1893 SUPERFAMILY Chromo domain-like 362 401 IPR016197 -
Ahy8g1312 1893 SMART PHD_3 201 246 IPR001965 -
Ahy8g1312 1893 ProSiteProfiles Zinc finger PHD-type profile. 199 248 IPR019787 -
Ahy8g1312 1893 Coils Coil 1013 1051 - -
Ahy8g1312 1893 MobiDBLite consensus disorder prediction 1338 1359 - -
Ahy8g1312 1893 MobiDBLite consensus disorder prediction 1387 1401 - -
Ahy8g1312 1893 Gene3D - 253 326 - -
Ahy8g1312 1893 MobiDBLite consensus disorder prediction 1365 1385 - -
Ahy8g1312 1893 CDD SF2_C_SNF 524 637 - -
Ahy8g1312 1893 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 7 405 - -
Ahy8g1312 1893 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 419 1854 - -
Ahy8g1312 1893 MobiDBLite consensus disorder prediction 1338 1413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1312 Ahy-Chr8 29023773 29040110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1312 202 369 Core DNA Replication Machinery Family AT4G14700 28.000 2.11e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1312 - K11642 aip:107610432 3547.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0505 18 4686628 4699861 Ahy8g1312 8 29023773 29040110 hybridization
Ahy8g1312 8 29023773 29040110 Ahy13g0320 13 3222712 3232123 PCT
Ahy13g0320 13 3222712 3232123 Ahy8g1312 8 29023773 29040110 PCT