Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1302 ATGTCTGAGGATGTTGGTAATAATATGAAGGACTCTTGGTTTTTCGAGAAGAATTTTAATGGCCTGTCCGACGAGGCTTTTGATGATGTCTTCAGCTTTTTAGATTTCCCGTTGGAAGATGTGGAACCGAATGTTGTTGAAGAAGACTGGGATGCTCAGTTTAAACGCATTGAGCCATGTTATGATGTTTTTTCGGTGTCATCGACTGTGCTCTGTAGTGATAAAACCCAAAATGAAAAGCCACAACTTGGGGGAAGTTTCTCTGGTTCTAGTAATGAGGTTTCTCCAATAAAACAGCTGGATGAGACTGCTGGATTGGATGTTGGAAAAACCATTCTGAACCAGAATTCATCTCTCAATGGAAAAGATTTGCATCAACTTCGAACCTACAGCCCAGTTTCTGTTTTTGAAAGCAGTAGTACTTCTTCAGCTGAGAATTCCAACCTTGATCTACCTGCCATCCCGGTAAAGCGTGCTCGAAGCAAGCGCCAGCGTGCATCAAGCTTCAGTCCTCTATTTGTGATTCCTTCTGTTCCTACTTCACCGGCTTGGCAAATTTATGAAATGAAAGTTGACCCGGAATCAAATTTAGGGACACACCATGCTGAGAAATCATTAAACAACACAAAAAAACAGAGGAAAAGGGATCTCCCTGTGCTTTCAGGTCACAATGACATGAAAAGATCCTCATCACAGGAGCCAGTTCCCACCAGAAAATGCATGCATTGCGAGGTGACAAAGACCCCACAGTGGAGAGAGGGACCGATGGGTCCAAAGACGCTGTGCAATGCCTGCGGTGTTCGATACAGGTCTGGTCGCCTCTTCCCCGAATATCGACCAGCAGCTAGCCCCACTTTTGTACCATCAGTGCATTCAAACTGTCATAAGAAGGTCATAGAGATGAGAAGCAAAGGCATCCAGGCAAGCCTTAGGAATCCATTGTCACCGATGTCGAACCTTCATGGAAATTCTGTAGGATAA 981 0.4444 MSEDVGNNMKDSWFFEKNFNGLSDEAFDDVFSFLDFPLEDVEPNVVEEDWDAQFKRIEPCYDVFSVSSTVLCSDKTQNEKPQLGGSFSGSSNEVSPIKQLDETAGLDVGKTILNQNSSLNGKDLHQLRTYSPVSVFESSSTSSAENSNLDLPAIPVKRARSKRQRASSFSPLFVIPSVPTSPAWQIYEMKVDPESNLGTHHAEKSLNNTKKQRKRDLPVLSGHNDMKRSSSQEPVPTRKCMHCEVTKTPQWREGPMGPKTLCNACGVRYRSGRLFPEYRPAASPTFVPSVHSNCHKKVIEMRSKGIQASLRNPLSPMSNLHGNSVG* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1302 326 MobiDBLite consensus disorder prediction 196 235 - -
Ahy8g1302 326 Gene3D - 231 313 IPR013088 GO:0006355|GO:0008270
Ahy8g1302 326 ProSitePatterns GATA-type zinc finger domain. 240 265 IPR000679 GO:0006355|GO:0043565
Ahy8g1302 326 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 237 295 - -
Ahy8g1302 326 MobiDBLite consensus disorder prediction 196 222 - -
Ahy8g1302 326 PANTHER GATA TRANSCRIPTION FACTOR 27 304 - -
Ahy8g1302 326 CDD ZnF_GATA 239 286 IPR000679 GO:0006355|GO:0043565
Ahy8g1302 326 Pfam GATA zinc finger 240 273 IPR000679 GO:0006355|GO:0043565
Ahy8g1302 326 ProSiteProfiles GATA-type zinc finger domain profile. 234 270 IPR000679 GO:0006355|GO:0043565
Ahy8g1302 326 PANTHER GATA TRANSCRIPTION FACTOR 13-RELATED 27 304 - -
Ahy8g1302 326 SMART GATA_3 234 284 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1302 Ahy-Chr8 28796938 28800792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1302 16 304 C2C2-Gata Transcription Factor Family AT1G08010 41.216 3.34e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Ahy8g1302 GATA 3.70E-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1302 - - gmx:100813303 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0493 18 4511451 4515688 Ahy8g1302 8 28796938 28800792 hybridization
Ahy8g1302 8 28796938 28800792 Ahy13g0332 13 3376973 3380656 PCT
Ahy13g0332 13 3376973 3380656 Ahy8g1302 8 28796938 28800792 PCT