Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1301 ATGAAGGAAGCTGAGAAGAGCTTGGATCCGCAGCTATGGCATGCTTGCGCCGGTGGCATGGTTCAGATGCCTCCGGTGAACTCCAAAGTCTTCTACTTTCCACAAGGGCATGCCGAGCATGCACAAACTAACGTTGATCTGGCAGCTCCCCTGAGAGTTCCTTCCTTCATCCTCTGCCGCGTGGCGCAGGTGAAATTCCTTGCTGACCCTGAAACCGATGAAGTCTTTACAAGGATAAGCTTGGTTCCCCTGAGGAATTCAGAGCTTGATTCTGATGATGGCGGTGTCCTTGATGCCAATGGTTTGGAGAATTCAGAAAAGCCTGCTTCTTTTGCAAAGACCTTAACTCAATCCGATGCAAACAATGGTGGGGGGTTCTCTGTTCCAAGGTACTGTGCAGAAACAATCTTCCCCCGACTCGATTACTCCGCAGAGCCGCCGGTTCAGACCGTGATCGCCAAGGATGTTCATGGTGAAGTTTGGAAGTTCAGGCACATATATAGGGGCACACCGAGGAGGCACTTGCTCACAACAGGGTGGAGCAGTTTTGTCAACCAGAAGAAACTGGTTGCAGGGGATTCAATTGTGTTCCTGAGGGCCGAAAATGGTGATCTCTGTGTTGGGATTAGGCGTGCCAAGAGGGGAACAGGTGGAGGATCGGAGGCGCCATCAGGATGGAGCTCCGGGAATGGAAGTTGTGGTCTTGGCTCTTATGGAGCATTCTCTGCCTTCTTGAGAGAGGAGACCAAGCTGTTGAGGAATGGTTGTGGGAATTCGAGTCCCGGTGGCGGCGGCGGCGGCGGTGGTTTGAATGGAAAAGCTAAAGTAAGTCCTGAATCTGTGAGGGAAGCTATAACACTGGCTGCTAGCAATCAGCCATTTGAAGTTGTTTATTATCCAAGGGCAAGCACACCGGAGTTTTGCATCAAGGCTTCGGCTGTGAGGGCAGCAATGAGGATACAATGGAGCACTGGGATGAGGTTCAAGATGGCCTTTGAGACTGAGGATTCTTCTAGGATCAGCTGGTTCATGGGGACCATTGCTTCTGTTCAGGTTGTTGATCCTATCCGCTGGCCTAATTCCCCTTGGAGACTTCTTCAGGTTACTTGGGATGAGCCAGATTTGTTACATAATGTGAAGCGTGTAAGCCCATGGTTGGTTGAATTGGTATCAAGCATGCCAGCCATCAATCTATCGCCCTTCTCTCCGCCAAGGAAGAAACTCCGGTTTCCACAACACCCCGACTTCCCCCTCGACGTTCAATTTCCTATACCGTCGTTTTCAGGCAACCCCCTAGGGCCTCATAGCAGCCCCTTGTGTTGTCCATCTGATAATGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAAATTGGAATATCTCTTTCAGATCTCTACCTTAACAACAAACTGCAGTTGGGGGTGATTCCGGCCGCGAATGTCCAGCGACTGGATTTGCATTCGGGGTTTCCCAGTGGCGGCAACTTCACTGGCCATGACAAGAGTAAAGAAAGCTTGTCATGCTTGCTAACCATGGGAAATTCTCACAATAAGAGTTTGGAGAAGTCTGATAATGTGAAGAGACACCAATTTTTGCTTTTTGGTCAACCAATACTCACTGAGCAACAAATCTCCAGAAGGCCTTCTTCTTCTGGTGGTGATGATGATGTGTTGCCTCAGAATGGTACCAAGAAAACTTCAATAGATGAGAATGAGAACAAAGACAAAGAGAAGTGGTTTTTCAATGACTCTCAATCTCCTCTTTCACAACAATTTTCACCTGGTAAATCAAAATCATCTTGTAGCACAGAGTTATCTTGGCAAATTGGGTTGGATACTGGTCATTGCAAGGTGTTCATGGAGTCAGAAGATGTTGGAAGGACACTTGACCTGTCACGTCTTAGCTCCTATGATGAACTGTATAGGAGACTCAGCAACATGTTTGGAATCGAAAGATCTGAGTTGTTGAGTCATGTACTCTACCGTGATGCAACTGGTGCTGTCAAGCAAACAGGTGAAGAACCCTTCAGTGACTTCATGAAGACAGCAAAAAGATTGACAATTCTGACGGATCCAAGCAACAAGGATGCAAGGAGGGCATGGATTACAGGTACTCGGAATGGTGAACATGGATTGGATGCATCAAACAAGACAGGTCCTCTTAGCATATTTGCTTGA 2178 0.4816 MKEAEKSLDPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHAQTNVDLAAPLRVPSFILCRVAQVKFLADPETDEVFTRISLVPLRNSELDSDDGGVLDANGLENSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGTGGGSEAPSGWSSGNGSCGLGSYGAFSAFLREETKLLRNGCGNSSPGGGGGGGGLNGKAKVSPESVREAITLAASNQPFEVVYYPRASTPEFCIKASAVRAAMRIQWSTGMRFKMAFETEDSSRISWFMGTIASVQVVDPIRWPNSPWRLLQVTWDEPDLLHNVKRVSPWLVELVSSMPAINLSPFSPPRKKLRFPQHPDFPLDVQFPIPSFSGNPLGPHSSPLCCPSDNAPAGIQGARHAQIGISLSDLYLNNKLQLGVIPAANVQRLDLHSGFPSGGNFTGHDKSKESLSCLLTMGNSHNKSLEKSDNVKRHQFLLFGQPILTEQQISRRPSSSGGDDDVLPQNGTKKTSIDENENKDKEKWFFNDSQSPLSQQFSPGKSKSSCSTELSWQIGLDTGHCKVFMESEDVGRTLDLSRLSSYDELYRRLSNMFGIERSELLSHVLYRDATGAVKQTGEEPFSDFMKTAKRLTILTDPSNKDARRAWITGTRNGEHGLDASNKTGPLSIFA* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1301 725 Gene3D - 109 213 IPR015300 -
Ahy8g1301 725 Gene3D - 321 395 - -
Ahy8g1301 725 ProSiteProfiles B3 DNA-binding domain profile. 111 213 IPR003340 GO:0003677
Ahy8g1301 725 MobiDBLite consensus disorder prediction 543 575 - -
Ahy8g1301 725 Pfam B3 DNA binding domain 111 212 IPR003340 GO:0003677
Ahy8g1301 725 Gene3D - 612 696 - -
Ahy8g1301 725 PANTHER AUXIN RESPONSE FACTOR 2 702 - -
Ahy8g1301 725 SUPERFAMILY DNA-binding pseudobarrel domain 104 217 IPR015300 -
Ahy8g1301 725 MobiDBLite consensus disorder prediction 543 566 - -
Ahy8g1301 725 SMART B3_2 111 213 IPR003340 GO:0003677
Ahy8g1301 725 CDD B3_DNA 110 211 IPR003340 GO:0003677
Ahy8g1301 725 ProSiteProfiles PB1 domain profile. 613 693 IPR000270 GO:0005515
Ahy8g1301 725 Pfam Auxin response factor 284 367 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Ahy8g1301 725 MobiDBLite consensus disorder prediction 255 275 - -
Ahy8g1301 725 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 702 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1301 Ahy-Chr8 28777729 28781811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1301 5 691 B3 DNA Binding Superfamily AT4G30080 58.083 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Ahy8g1301 B3 4.70E-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1301 - - gmx:100778135 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0492 18 4500431 4504490 Ahy8g1301 8 28777729 28781811 hybridization
Ahy8g1301 8 28777729 28781811 Ahy13g0333 13 3391388 3395119 PCT
Ahy13g0333 13 3391388 3395119 Ahy8g1301 8 28777729 28781811 PCT