Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1292 ATGCGATTGCTATGGGGGATAAAGTTGCCCCTACTCATATTCATTCAACTTTTATGTCTCAGCAAATTATATGGTTCACTTAGCAGATCACAGCAATTGGGATGCAGCATTGTGAAGTATCCGTGTCGAATGCAATGGCCGTGTCGCCTTAACTGCTATAAACTAAAAGATCCAGGTGCTTTTTCACTGATTCTCTGTGGAATAGCAGCAAAGGTGGATGGAAACAATGACATTCCAACACTTACACCTGTTCAAGAAGCTCAAGTTAACAGGCAGGGTGAAAGAAGGGCTGCTGCCGCCACAGTTGGTGGCGTTGCTGCCGCCTTATTGGTGATTATCATTGTGGTAATTGTGTATATCTGCTTGATGCGTCTTAAAAGAATGATGAGGCAAACATCTGAGAGTGCTTCTTCTATGCCATCTCCCACAGTTGAGATGGGAAGAAGCAACAACTCGCTGCAAGTAAACGAACTGTGTCCATATTATGCACACAATGCAAGGCAGTTAACAATTTTAGAACTAGAACAAGCTACAAGATGTTTCAATCAAAGTAATATTGTAGGTGAAGATAGATTTGGTTTGGTTTACCAGGGCTTGCTTCAAGATGGATCTATTGTGGCTATAAAGAGGAGAATATCTTCTCTAACGACGAATTTCATCCGCGAGGTGAGGAAGATATCATGCATTCACCATATGAATCTTGTGAAGCTTATAGGCTACTATGAAGATGGCTATCAACAATTACTAGTGTATGAACATCTCCCTAATGGCCATGTAGGGAATCACCTATATGATAGTGAAGGTTTACCTATTGGAAAGTTAGACTTGTGGAGGAGGTTATCCATTGCTTTAGGAGCATCCAAAGGACTGGAACATCTTCACAGTTTGGATCCTCCTTTGGTTCACACCAATTTCAGAACTAGAAATGTTTTTTTGGATGGAAGTTACACTGCCAAGGTTTCGGATTACGGATTCGGCACATTGCAAAGAGAAGTTGATCAGGCTGCAGCCTCATCTTCATGCATAGATTGCTTTCTTGACCCAGAGTTGAGTTCACCAGAAAACTATACACAGCAGAGTGATGTATACAGCTTTGGAGTCTTTTTACTGGAGTTGATTAGTGGTTGTGAAGTTTATAACAGAAACATGTCAACCTTAGAAGAAAACCTAGTATTCCAGGCAAAGGCAAAGGCAAAGGATAGTGATGGGTTGGAGAAGTTGATTGATGTAACATTAGGAGAGCATGAAAAACATGGTGCAAGGAGAATGGTGAGGTTGGCATTGTTATGCATAAGCAAGAGTTATAGAAGGCCATCAATGGGGCAAATAGTGGAAGAGCTAGAGCGGATTCAAAGAGAGATTGCTCCTTTGTATTCACAAGTCAATGAGGACATTGGTGTCGTCACTCTTGGGAGTGAACTTTTCCAATAA 1431 0.4137 MRLLWGIKLPLLIFIQLLCLSKLYGSLSRSQQLGCSIVKYPCRMQWPCRLNCYKLKDPGAFSLILCGIAAKVDGNNDIPTLTPVQEAQVNRQGERRAAAATVGGVAAALLVIIIVVIVYICLMRLKRMMRQTSESASSMPSPTVEMGRSNNSLQVNELCPYYAHNARQLTILELEQATRCFNQSNIVGEDRFGLVYQGLLQDGSIVAIKRRISSLTTNFIREVRKISCIHHMNLVKLIGYYEDGYQQLLVYEHLPNGHVGNHLYDSEGLPIGKLDLWRRLSIALGASKGLEHLHSLDPPLVHTNFRTRNVFLDGSYTAKVSDYGFGTLQREVDQAAASSSCIDCFLDPELSSPENYTQQSDVYSFGVFLLELISGCEVYNRNMSTLEENLVFQAKAKAKDSDGLEKLIDVTLGEHEKHGARRMVRLALLCISKSYRRPSMGQIVEELERIQREIAPLYSQVNEDIGVVTLGSELFQ* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1292 476 Gene3D Phosphorylase Kinase; domain 1 143 253 - -
Ahy8g1292 476 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 68 474 - -
Ahy8g1292 476 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 68 474 - -
Ahy8g1292 476 ProSiteProfiles Protein kinase domain profile. 181 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g1292 476 SUPERFAMILY Protein kinase-like (PK-like) 161 457 IPR011009 -
Ahy8g1292 476 Pfam Protein tyrosine and serine/threonine kinase 184 446 IPR001245 GO:0004672|GO:0006468
Ahy8g1292 476 Gene3D Transferase(Phosphotransferase) domain 1 254 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1292 Ahy-Chr8 28566615 28570082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1292 105 454 Receptor kinase-like Gene Family AT4G02010 34.530 9.79e-53 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Ahy8g1292 PK_Tyr_Ser-Thr 2.70E-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1292 - - gmx:100815066 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0485 18 4352713 4356048 Ahy8g1292 8 28566615 28570082 hybridization