Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1281 ATGATGATGATGTCTTCATCAGAAGCCTTTTCATCATCACCATCAGCAGCAGCTCCTTCGAGTTCCAGCATCATCCATTACGGAAACCCTAATTCAATTCCAGGAGTAGCGAAGAGAAAGCGAAGTCAACCAGGAAGACCAGATCCAGAGGCAGAAGTAATAGCTCTATCACCAAAGTCGCTGATGGCAACAAACCGTTTCGTATGCGAGATATGCAAGAAAGGGTTCCAGAGGGACCAGAACCTACAGCTGCACCGGCGAGGGCACAACCTGCCGTGGAAGCTTCGGCAGAGGGAGAAGGAGGAGGTGGTGCGGAAGAAGGTGTACGTATGTCCGGAGAAGAGCTGCGTCCACCACGAGAGTTCTCGTGCGCTGGGGGACTTGACGGGGATAAAGAAACACTACAGCAGAAAGCACGGCGAGAAGAAGCTGAAATGCGAAAAGTGCTCCAAGAAATACGCTGTTCACTCTGATTGGAAGGCTCATACCAAGATCTGTGGCACCAGAGAGTATCGTTGTCACTGTGGCACTCTCTTCTCCAGGAAGGACAGCTTCCTCACTCACAGATCTTTTTGTCAAGCCTTGCCTCAATTTCATACTGCTTCCATGCCACCACCATCACTACCACTATGGCTTGACCAAACAATCAACCAAGAGAACAAGGTCGGAGACTTGTTGTACTCATCATCATCATCCACACTCATGTCGGCCACTGCGTTGTTGCAGAAAGCTACACAAATGGAATCTACCCCCATGGCTTCTAACAACGACAATGCCTTTGTTGGATTCATGCTCAGCTCTTCGTCTCAGTTCTCCTCCTTCAATAACGATTCAAACTTGATGCAACACCCACTTGGGTTGACCAGAGACTTTCTTGGCGTTGGGGTCACCACCAAGTTCATGACTAATCCAATGGGATCCCTCCTCGACTTCCAAACCAATCCTCTTCATCATCATCAAGAATATATGTAG 972 0.4877 MMMMSSSEAFSSSPSAAAPSSSSIIHYGNPNSIPGVAKRKRSQPGRPDPEAEVIALSPKSLMATNRFVCEICKKGFQRDQNLQLHRRGHNLPWKLRQREKEEVVRKKVYVCPEKSCVHHESSRALGDLTGIKKHYSRKHGEKKLKCEKCSKKYAVHSDWKAHTKICGTREYRCHCGTLFSRKDSFLTHRSFCQALPQFHTASMPPPSLPLWLDQTINQENKVGDLLYSSSSSTLMSATALLQKATQMESTPMASNNDNAFVGFMLSSSSQFSSFNNDSNLMQHPLGLTRDFLGVGVTTKFMTNPMGSLLDFQTNPLHHHQEYM* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1281 323 SMART c2h2final6 109 139 IPR013087 -
Ahy8g1281 323 SMART c2h2final6 144 164 IPR013087 -
Ahy8g1281 323 SMART c2h2final6 67 89 IPR013087 -
Ahy8g1281 323 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 89 IPR013087 -
Ahy8g1281 323 ProSitePatterns Zinc finger C2H2 type domain signature. 69 89 IPR013087 -
Ahy8g1281 323 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 20 196 - -
Ahy8g1281 323 SUPERFAMILY beta-beta-alpha zinc fingers 66 164 IPR036236 -
Ahy8g1281 323 Gene3D Classic Zinc Finger 63 90 - -
Ahy8g1281 323 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 20 196 - -
Ahy8g1281 323 MobiDBLite consensus disorder prediction 1 50 - -
Ahy8g1281 323 Gene3D Classic Zinc Finger 101 193 - -
Ahy8g1281 323 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1281 Ahy-Chr8 28475169 28476824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1281 38 311 IDZ Gene Family AT4G02670 52.063 1.27e-101 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy8g1281 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1281 K25870 - adu:107461721 603.979