Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1279 ATGACGGTGGTAGACATCCTGTTCCGGGTGGACTCCATATGCAGCAAATACGACAAATACGACCTCGACAAGCAGCGGGAACTCAATGCCTACGGTGATGACGCCTTCGCTCGCCTCTACGCCACCGTTGATTCCACCATCGAAGCCGCCCTCAAGAAATCGGATGCTGCCTTGGCGGAGAACAACAGAGCAGCTGCTGCTGCTATGAATGCGGAGGTTCGACGCGCCAAGGGTAGACTCATGGACGAGATTCCCAAGCTCCGCAAATTGGCCAAGAAGAAGGTTAAAGGTTTGACAGACGAAGATTTAGCGATCCGTGAGGATCTTGTATTGGCATTGCCAGAAAGAATTCAAGCAATTCCCGATGGTATTACCACTGTCAATCAAACAGGAGGAGGATGGACATCGCAGCCCAACATCAAGTTTGATTCAGACGTGCATCACGGCACTGAGTATTTCGACCAAACTGAAGAATCCAGTCAGTTCAGAAATGAGTATGAAATGCGCAGGATCAAACAGGATGAAGGTCTTGACTTCATATCGGAGGGATTGGATACTTTGAAAAATCTAGCTCATGACATGAGTGAGGAAATGGATCGGCAAGTTCCTCTAATGGACGAAATTGACACAAAGGTCAATAGGGCAACAGCTGATGTGAGAAACACTAACAAAAGATTGAAGCAAAGTCTCACTGAGATGAGGTCTACTCAAAATTTCTTCATTGACATCATTCTGCTCTGTATTCTTCTCAGCATTGTTCTCTATATATACAATCAACTGAGGTGA 786 0.4631 MTVVDILFRVDSICSKYDKYDLDKQRELNAYGDDAFARLYATVDSTIEAALKKSDAALAENNRAAAAAMNAEVRRAKGRLMDEIPKLRKLAKKKVKGLTDEDLAIREDLVLALPERIQAIPDGITTVNQTGGGWTSQPNIKFDSDVHHGTEYFDQTEESSQFRNEYEMRRIKQDEGLDFISEGLDTLKNLAHDMSEEMDRQVPLMDEIDTKVNRATADVRNTNKRLKQSLTEMRSTQNFFIDIILLCILLSIVLYIYNQLR* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1279 261 Pfam SNARE domain 204 254 IPR000727 -
Ahy8g1279 261 PANTHER SYNTAXIN 1 258 IPR045242 -
Ahy8g1279 261 CDD SNARE_Qc 172 228 - -
Ahy8g1279 261 SUPERFAMILY SNARE fusion complex 161 227 - -
Ahy8g1279 261 Coils Coil 205 225 - -
Ahy8g1279 261 PANTHER SYNTAXIN-72 1 258 - -
Ahy8g1279 261 Gene3D - 167 228 - -
Ahy8g1279 261 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 167 229 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1279 Ahy-Chr8 28451755 28455725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1279 1 261 SNARE and Associated Proteins AT3G09740 63.158 3.86e-123 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1279 K08506 - gmx:100817729 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0472 18 4204683 4206489 Ahy8g1279 8 28451755 28455725 hybridization