Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1254 ATGTTCGATCTTAACCTGAATGCCGATTCCACTCAGCACGATGACTCGCCCGTGCTGCTCGGGGAGAAGATTCCGGAAGCGTCCTCCGGGACCTCGAATTCCTCCGTGGTGAATGCGGAGGGTTCGAGCAACGGAGGTGGTGCCGGAGACGACGACTCGTGTTCCACACGCGCCACTGGTAGCGGCGATGTGTACACCTTCAATTTCGATATTCTGAAGGTGGAAGGCGGGAGCGACAACTCCGTCGCGACGAAGGAACTGTTTCCGGTGAGCGCCGGGAACTGGCAGGGGCAGGCTTCGACGTCGTCGATTCCGGCGAGGAAGAGCTGGATGGATCTGTCGCTGGATCAGCATCGAGGTGAAAGCGCGGAGATGAAGAAGATTGTTCAGGTTCAGCAGCAGCAACAGCAACAACAGCCTCCGCAAGCGAAGAAGAGTAGGAGGGGCCCACGCTCAAGGAGCTCGCAGTACAGAGGTGTCACCTTCTACAGGAGGACCGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTTTATTTGGGTGGATTTGACACCGCTCATGCCGCTGCTAGAGCTTATGATCGAGCTGCTATCAAGTTTAGGGGACTTGATGCTGACATCAATTTTAATCTCGTTGACTATGAGGACGATCTCAAACAGATGAAAAATCTCTCCAAGGAGGAATTTGTTCACATACTCCGTCGCCAAAGCACTGGTTTCTCAAGAGGAAGTTCAAAATACCGAGGAGTGACACTTCACAAATGTGGCCGGTGGGAAGCTCGAATGGGACAATTCCTTGGCAAAAAGTATATATATCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGACAAAGCAGCTATCAAATGCAATGGAAGAGAGGCAGTCACTAACTTCGAGCCAAGTACGTATGAAAGCGAGGTCAAAACTGAAGCCATTAGTGAAGGTGGCAGTCACAACCTTGACCTCAATTTAGGCATGGCTACCCCAGGACATGATCCCAAAGAAAACAGGGGGAATCTTCAGTTCCAGTCTGTCCCTTACGATGTGCATCCCGGAAGAAGTTCGAGGATGGAAACCCATGTTAATTCAGTTATTGGTGATCCGTCTTTTAAAAGGCTGGTTGTAAATGAAGAGCGTTCTTCTGTCTGGAATGCCTCGTATTCGAGTTTCTTTCCCAATGAGGAAAGAGCAGAGAGAATCGGCATAGATCCCTCACATGGAGTCCCAGGCTGGGCGTGGCAAACGCACGGTCCGGGCAGTGCTATCCCGGTACCACCGTTCTCTACTGCAGCATCATCAGGATTCTCAATTTCTGCTACCTATCCATCGCCTGCCATGTTTCCAACAAAACCGATGAACTCAATTCCTCAGAGTATCTCATTTGCTTCATCCGTTGCACCTGGTAGCAATGCAGCTCATCAATACTATTACCAGGTGAAGTCCCCGCACGCACCATCCTAA 1479 0.5078 MFDLNLNADSTQHDDSPVLLGEKIPEASSGTSNSSVVNAEGSSNGGGAGDDDSCSTRATGSGDVYTFNFDILKVEGGSDNSVATKELFPVSAGNWQGQASTSSIPARKSWMDLSLDQHRGESAEMKKIVQVQQQQQQQQPPQAKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNLVDYEDDLKQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYESEVKTEAISEGGSHNLDLNLGMATPGHDPKENRGNLQFQSVPYDVHPGRSSRMETHVNSVIGDPSFKRLVVNEERSSVWNASYSSFFPNEERAERIGIDPSHGVPGWAWQTHGPGSAIPVPPFSTAASSGFSISATYPSPAMFPTKPMNSIPQSISFASSVAPGSNAAHQYYYQVKSPHAPS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1254 492 PRINTS Ethylene responsive element binding protein signature 287 307 IPR001471 GO:0003700|GO:0006355
Ahy8g1254 492 PRINTS Ethylene responsive element binding protein signature 249 260 IPR001471 GO:0003700|GO:0006355
Ahy8g1254 492 ProSiteProfiles AP2/ERF domain profile. 248 305 IPR001471 GO:0003700|GO:0006355
Ahy8g1254 492 MobiDBLite consensus disorder prediction 127 145 - -
Ahy8g1254 492 SMART rav1_2 248 311 IPR001471 GO:0003700|GO:0006355
Ahy8g1254 492 SMART rav1_2 156 218 IPR001471 GO:0003700|GO:0006355
Ahy8g1254 492 CDD AP2 247 307 IPR001471 GO:0003700|GO:0006355
Ahy8g1254 492 MobiDBLite consensus disorder prediction 1 55 - -
Ahy8g1254 492 CDD AP2 156 211 IPR001471 GO:0003700|GO:0006355
Ahy8g1254 492 MobiDBLite consensus disorder prediction 125 157 - -
Ahy8g1254 492 Pfam AP2 domain 156 204 IPR001471 GO:0003700|GO:0006355
Ahy8g1254 492 Pfam AP2 domain 247 297 IPR001471 GO:0003700|GO:0006355
Ahy8g1254 492 Gene3D AP2/ERF domain 155 214 IPR036955 GO:0003700|GO:0006355
Ahy8g1254 492 Gene3D AP2/ERF domain 247 306 IPR036955 GO:0003700|GO:0006355
Ahy8g1254 492 SUPERFAMILY DNA-binding domain 155 212 IPR016177 GO:0003677
Ahy8g1254 492 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 460 - -
Ahy8g1254 492 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 1 460 - -
Ahy8g1254 492 MobiDBLite consensus disorder prediction 26 55 - -
Ahy8g1254 492 SUPERFAMILY DNA-binding domain 247 306 IPR016177 GO:0003677
Ahy8g1254 492 ProSiteProfiles AP2/ERF domain profile. 156 212 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1254 Ahy-Chr8 28092164 28096533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1254 74 372 AP2-EREBP Transcription Factor Family AT4G36920 58.750 3.89e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Ahy8g1254 AP2 2.90E-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1254 K09284 - gmx:100777102 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0451 18 3935716 3940068 Ahy8g1254 8 28092164 28096533 hybridization
Ahy8g1254 8 28092164 28096533 Ahy13g0392 13 4028462 4032318 PCT
Ahy13g0392 13 4028462 4032318 Ahy8g1254 8 28092164 28096533 PCT