Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1249 ATGGCAAGCACGTACAACAACCTCAAGGATATTGAGGCATCTTCAGACCACTTAATATTGAGGATTAAAGTGAGAGTCGTGAAAATATGGTCATTGTCTCCTGCTGAGCAAAAATACGTGAAGCCAACTTTAGAGTTGGTGGTCATGGATTACGTGGGGGATCGAATCCAGTGCACTATTAGGAATGCTCAGAGGAGGCTCTTTGAAGATGAGTTATCAGAGGGAAAAATCTATATTGTATGTAACTTCTCAACTTCCTTGAATGACCAGAAATACAAGGCCACTAATCATGCATGTAGGATATACTTCAAGAGGGATACTCAACTTCAGATGGTCCATGATCCATCCTTTTCGGAGAATGTGTTTCGTTTTGTTCCTAATGATCTAATATTGAACCACACAAATGCTCAGTCGCATCTTATAGATGTTATTGGTCTACTTACTGGCAAGGGTGACATAATTGAATTTACTAAGAATGGCAAGAAGTGCAGCTACATTGTTCTCGAGCTTGATGACATGCAGGGAAAAGGCAAGATTAGGTGTACACTTTGGGAGGATTTTGCAACTATGTTGGTCAAGCACATTGAAGAGCAACCAACATCAGAGTACATCATCATTGTACAGTTCGCTAAGTTCAACCTCTTTAAAGGTGCAATGGGCATATCAAATACCAATCATAATTCAATTCTCTACATCAATGCGGACTTCCAAGAGGTTAAGGATTTTCGCAAGAGCGTCGTCATGGCGGGGGTTCCACGTGCAAACCAACTATCCCAAATTGCTGCGGAGCCAGCGTACTCTATGGAGGACGATCTCATCAACGTCTCCATTTATAAACCCATTTCTGAACTCAAGGCATCCATTGAGCAAAACCTTGCACTGGAACACTCAGAACTATTGACCCTGCAAACTGCTTCCACCGACACGCCAAAGGGCACGGGTTCTCCTTCTGTTGTGGCTTTGGTGGACAACTCTAATGATGCTTTCTCAATCCCCAAGAGAAACATTATTAGTGGTGGATGCTCTAAGCGACTCATTGATCTTTATCCAGACTCTGCTAATGGATCATCATCGAAGTGTAGAAAGCTCGAAGATGGCATTCCCGGAGTTGATAAAGTCTACCAAGATTAG 1131 0.4253 MASTYNNLKDIEASSDHLILRIKVRVVKIWSLSPAEQKYVKPTLELVVMDYVGDRIQCTIRNAQRRLFEDELSEGKIYIVCNFSTSLNDQKYKATNHACRIYFKRDTQLQMVHDPSFSENVFRFVPNDLILNHTNAQSHLIDVIGLLTGKGDIIEFTKNGKKCSYIVLELDDMQGKGKIRCTLWEDFATMLVKHIEEQPTSEYIIIVQFAKFNLFKGAMGISNTNHNSILYINADFQEVKDFRKSVVMAGVPRANQLSQIAAEPAYSMEDDLINVSIYKPISELKASIEQNLALEHSELLTLQTASTDTPKGTGSPSVVALVDNSNDAFSIPKRNIISGGCSKRLIDLYPDSANGSSSKCRKLEDGIPGVDKVYQD* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1249 376 CDD RPA1_DBD_A_like 21 107 - -
Ahy8g1249 376 SUPERFAMILY Nucleic acid-binding proteins 136 246 IPR012340 -
Ahy8g1249 376 PANTHER REPLICATION FACTOR A 1, RFA1 20 290 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy8g1249 376 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 20 290 - -
Ahy8g1249 376 CDD RPA1_DBD_B_like 142 246 - -
Ahy8g1249 376 Pfam Domain of unknown function DUF223 45 136 IPR003871 -
Ahy8g1249 376 Gene3D - 117 251 IPR012340 -
Ahy8g1249 376 Gene3D - 6 114 IPR012340 -
Ahy8g1249 376 SUPERFAMILY Nucleic acid-binding proteins 7 117 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1249 Ahy-Chr8 27950410 27967756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1249 48 243 Core DNA Replication Machinery Family AT2G06510 27.586 2.68e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1249 - - adu:107461640 577.4