Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1236 ATGCTCTCACCTAAAAAATCAGTCAGAGATTCAGGGTGTGGCTCCAGATTTGTATTCTTCTCTGTAATCTTGGCTCTTCCTGCTTCATCTTCTGGACCTAGCTGTAACTGTATTCAAAGCCTGACTAATGGATTATCAAGCTACTCTGGCTTGGCAGTACAGGCGCTGGAGACAGTCTGGAGGGTTAACATGGGGGGTCCAACTGTCTCCTCTGGTAATGACACTCTTCAGCGAACCTGGGATCCGGATCTTAGCTTCCTAAAAGAAAAAAACCTTGCTGCTAATTTCTCAAATATTGGAGGTGTTCAATATGTGAACGGCTCGGCTACTGAAAATGATGCTCCGGCTAGTGTTTATGGTACTGGACAACAGATGAACTCACAAAGTGATCCACGTGTTAATTTCAATGTGACATGGGAGTTTAAGGTGGATTCTGGATTTCAGTACCTTGTTAGACTTCACTTCTGTGATTTAGTGAGTAAAGGTCTCAATGAACTCTACTTCAATGTTTATGTTGATTCCTTGTTTGCTGCCAAGGATCTTGATCTTGCTTCAATAAATCAAAATGTCTTGGGTGTTCCATATTATAGGGATGTTGTTACACCCTTGACATCTAGCAACTTGCTTCGAGTAAGTATGGGACCTTCTAATGTAAATAAGGACTACCCTAATGCCATTCTGAATGGTTTGGAGATCATGAAAATGAACAATTCTGTGGGAAGTCTTAGTACAGGGACAGCTGCTGTTGCTACTACTTCTGGTTCAAATTCAAAGAATGTTGGTGTAATTGTGGGTGCAGTTCTTGGGGCAGTATGTGCAGTGGTCTTGGCTGGACTTTTGTGTTTACTATGCAGGAAAAGAAGGCGGTTGGCGCGGCGGAGACAGTCGAAGACATGGATTCCTTTCTCCATCAATGGCACAACTTCTCACACCATGGGAAGTAAATATTCTAATGGTACTACAATTAGTGCTGCTTCAAACTTCGAGTACCGTGTTCCTCTTGCTGCAGTTCAGGAAGCTACAAACAATTTTGATGAGAGTTGGGTTATTGGGATTGGTGGCTTTGGGAAAGTATACAAGGGGGAATTGAGTGATGGCACTAAAGTGGCAGTTAAGAGAGGAAATCCTCGGTCACAGCAGGGTATTGCCGAGTTCCGAACTGAAATCGAAATGCTGTCTCAGTTCCGTCACCGGCATCTGGTATCTTTGATCGGCTATTGTGATGAAAGGAATGAAATGATACTGATATATGAGTATATGGAGAAAGGAACACTCAAGGGTCATCTATATGGTTCGGGGTTCCCAACCTTAAGTTGGAAGGAGAGGCTTGAGATATGCATTGGAGCTGCTAGAGGGCTTCATTATCTGCACACCGGCTATGCTAAAGCAGTTATTCACCGCGATGTGAAATCTGCAAATATCCTCCTTGATGAGAACCTGATGGCTAAAGTTGCTGATTTTGGATTATCCAAGACTGGGCCAGAACTTGATCAGACACATGTGAGCACAGCTGTTAAAGGAAGCTTTGGCTACCTTGATCCTGAATACTTCAGGAGGCAGCAGCTAACAGAAAAGTCTGATGTGTATTCATTCGGCGTGGTTCTGTTTGAAGTTCTTTGTGCAAGACCTGTCATAGATCCGTCCCTTCCCAGGGAGATGGTAAACTTGGCAGAATGGGCAATGAAGTGGCAGAAGAAGGGGCAATTGGAGGAGATCATAGATCCTGCACTTGCAAGCAACATAAGACCGGAATCTCTCAGGAAGTTTGGAGAAACCGCGGAGAAATGCTTGGCAGACTTCGGTGTAGACAGGCCTTCTATGGGAGATGTATTGTGGAATTTGGAGTATGCCCTGCAGCTTCAAGAGTCTGCTACTCAAGGGAATGATCCTCAAGAAAACAGTACTAATATGATCAGTCTCTCTCCACAGGTCAACAACTTCAACAACGATGCAAGCGCCTCTGCCATTAAATTTGAAGGCACAAATGTGGATGATCTGTCTGGTGTTTCAATGAGTAGGGTGTTCTCTCAGTTGGTGAAGTCAGAGGGGAGATGA 2055 0.4418 MLSPKKSVRDSGCGSRFVFFSVILALPASSSGPSCNCIQSLTNGLSSYSGLAVQALETVWRVNMGGPTVSSGNDTLQRTWDPDLSFLKEKNLAANFSNIGGVQYVNGSATENDAPASVYGTGQQMNSQSDPRVNFNVTWEFKVDSGFQYLVRLHFCDLVSKGLNELYFNVYVDSLFAAKDLDLASINQNVLGVPYYRDVVTPLTSSNLLRVSMGPSNVNKDYPNAILNGLEIMKMNNSVGSLSTGTAAVATTSGSNSKNVGVIVGAVLGAVCAVVLAGLLCLLCRKRRRLARRRQSKTWIPFSINGTTSHTMGSKYSNGTTISAASNFEYRVPLAAVQEATNNFDESWVIGIGGFGKVYKGELSDGTKVAVKRGNPRSQQGIAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEKGTLKGHLYGSGFPTLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLEEIIDPALASNIRPESLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQESATQGNDPQENSTNMISLSPQVNNFNNDASASAIKFEGTNVDDLSGVSMSRVFSQLVKSEGR* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1236 684 SMART serkin_6 344 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g1236 684 CDD STKc_IRAK 350 615 - -
Ahy8g1236 684 SUPERFAMILY Protein kinase-like (PK-like) 321 615 IPR011009 -
Ahy8g1236 684 PANTHER RECEPTOR-LIKE PROTEIN KINASE HERK 1 17 652 - -
Ahy8g1236 684 Gene3D Transferase(Phosphotransferase) domain 1 420 641 - -
Ahy8g1236 684 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Ahy8g1236 684 Pfam Malectin-like domain 46 235 IPR024788 -
Ahy8g1236 684 Gene3D Phosphorylase Kinase; domain 1 305 419 - -
Ahy8g1236 684 ProSiteProfiles Protein kinase domain profile. 344 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy8g1236 684 PANTHER OS07G0166700 PROTEIN 17 652 IPR045272 GO:0004714|GO:0006468
Ahy8g1236 684 Pfam Protein tyrosine and serine/threonine kinase 349 543 IPR001245 GO:0004672|GO:0006468
Ahy8g1236 684 Gene3D - 54 237 - -
Ahy8g1236 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1236 Ahy-Chr8 27749427 27752917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1236 46 684 Receptor kinase-like Gene Family AT3G46290 70.015 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Ahy8g1236 PK_Tyr_Ser-Thr 9.50E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1236 - - gmx:100305416 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0434 18 3742453 3745949 Ahy8g1236 8 27749427 27752917 hybridization
Ahy8g1236 8 27749427 27752917 Ahy13g0405 13 4204435 4207938 PCT
Ahy13g0405 13 4204435 4207938 Ahy8g1236 8 27749427 27752917 PCT