Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1222 ATGCCGATCTCTAAAATTGTGATTGGAAATGCTTCTGAGTTGAGGCAAAGCGATGCGCTTAAGGCCGCACTCGCTGAGTTCATCTCAATGCTTATCTTTGTTTTCGCCGGACAAGGCTCCGGCATGGCTTATAATAAGTTGACAAACAATGGCGCAGCAACACCAGCTGGCGTAGTGGCAGCATCATTGTCTCACGCCTTTGCTCTCTTTGTTGCAGTCTCCGTTGCCGCCAACATCTCCGGCGGCCACGTCAACCCTGCCGTCACTTTCGGCGCTTTCATTGGTGGCCACATCACTCTCCTCAGAACCATTCTCTATTGGATTGCTCAGTTGCTTGGCTCCGTTGTTGCTTGCTTGCTCCTTAAATTCGCCACAGCCGGACTAGAAACATCTGCATTTGCACTATCTTCTGGGGTTGGAGCATCGAATGCATTGGTGTTTGAGATTGTGATGACCTTTGGTCTGGTGTACACGGTGTATGCTACTGCCGTGGACCCAAAGAAGGGTGACATTGGGATCATTGCTCCAATTGCCATTGGCTTCATTGTGGGTGCTAACATTTTAGCCGGTGGGGCATTTGATGGTGCATCCATGAACCCAGCTGTATCTTTTGGGCCTTCTGTTGTTAGCTGGAATTGGGCCAACCACTGGGTCTACTGGGCCGGCCCATTCATTGGTTCAGCTATTGCAGCTATTGTCTACGACACTTTCTTTATTAACCACCACACTCATGAACCGCTCCCCGTCACAGATTACTAG 759 0.4993 MPISKIVIGNASELRQSDALKAALAEFISMLIFVFAGQGSGMAYNKLTNNGAATPAGVVAASLSHAFALFVAVSVAANISGGHVNPAVTFGAFIGGHITLLRTILYWIAQLLGSVVACLLLKFATAGLETSAFALSSGVGASNALVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPSVVSWNWANHWVYWAGPFIGSAIAAIVYDTFFINHHTHEPLPVTDY* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1222 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Ahy8g1222 252 Pfam Major intrinsic protein 13 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy8g1222 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy8g1222 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Ahy8g1222 252 SUPERFAMILY Aquaporin-like 13 246 IPR023271 -
Ahy8g1222 252 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 252 - -
Ahy8g1222 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy8g1222 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy8g1222 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy8g1222 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy8g1222 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy8g1222 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy8g1222 252 PANTHER AQUAPORIN-8 1 252 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1222 Ahy-Chr8 27594329 27595544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1222 1 252 Major Intrinsic Protein MIP AT4G01470 79.365 1.02e-142 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1222 K09873 - gmx:547794 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0416 18 3541802 3543239 Ahy8g1222 8 27594329 27595544 hybridization
Ahy8g1222 8 27594329 27595544 Ahy13g0423 13 4403988 4405822 PCT
Ahy13g0423 13 4403988 4405822 Ahy8g1222 8 27594329 27595544 PCT