Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1221 ATGGGAAAAATGGTTAACGAAGAGCAACAGAAGCAATCGCAGAAGCAGGAATTTCGAAAGGGGCCATGGACTGAGCAGGAGGACTTGAAGTTAGTTTCATTTGTGGGGCTGTTTGGAGACAGGAAATGGGACTTTATAGCAAAGGTTTCAGGTCTCAATCGAACTGGTAAGAGCTGCCGCCTCCGCTGGGTTAACTACCTCCACCCCGGCCTCAAACGTGGCAAGCTCACTCCCTTTGAAGAGAAGCTTGTCTTGGACCTCCACTCCAAGTGGGGCAATAGATGGTCAAGAATTGCTCGCAAGCTGCCCGGGCGCACGGACAACGAGATCAAGAATTACTTTAGAACTCACATGAGGAAGAAGGCTCAAGAGGAGAAGCGCGCGCTTGCATCACCAAGTTCTTCAAGCTGCCATTCCTCACTCTCTTCAAACAACAACAACAACCAAGCTGTTGATTCACATGCTTCCAAGAAAGCTGGAGAAGAGAGCTTCTATGACACAGGGGGGCCGGTCATGACTGTGGACTGCTCAACCGATTTGAAGGAAGAAGAAGGGTTCTCCATGGATGATATATGGAAAGATATTGAGCTTTGTGAAGAGAAGAACATTGTTGTTTATGATGGGAATAAGAGTGAAGAGGGTTGCAACTTCTCAAGTCCACCATCATGGGAGTATTCTTCTGACCCACTTTGGGTGATGGATGAACAAAGTGTGTTATTCCCAACTAGTGACCCATATTTTTCCTCATTTCTAACTGGCTAA 762 0.4698 MGKMVNEEQQKQSQKQEFRKGPWTEQEDLKLVSFVGLFGDRKWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKLTPFEEKLVLDLHSKWGNRWSRIARKLPGRTDNEIKNYFRTHMRKKAQEEKRALASPSSSSCHSSLSSNNNNNQAVDSHASKKAGEESFYDTGGPVMTVDCSTDLKEEEGFSMDDIWKDIELCEEKNIVVYDGNKSEEGCNFSSPPSWEYSSDPLWVMDEQSVLFPTSDPYFSSFLTG* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1221 253 SUPERFAMILY Homeodomain-like 18 114 IPR009057 -
Ahy8g1221 253 SMART sant 72 120 IPR001005 -
Ahy8g1221 253 SMART sant 19 69 IPR001005 -
Ahy8g1221 253 MobiDBLite consensus disorder prediction 128 154 - -
Ahy8g1221 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 122 IPR017930 -
Ahy8g1221 253 CDD SANT 80 118 IPR001005 -
Ahy8g1221 253 Gene3D - 75 161 - -
Ahy8g1221 253 Gene3D - 20 72 - -
Ahy8g1221 253 MobiDBLite consensus disorder prediction 124 166 - -
Ahy8g1221 253 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Ahy8g1221 253 PANTHER TRANSCRIPTION FACTOR MYB48-RELATED 15 238 - -
Ahy8g1221 253 CDD SANT 22 67 IPR001005 -
Ahy8g1221 253 MobiDBLite consensus disorder prediction 1 21 - -
Ahy8g1221 253 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Ahy8g1221 253 Pfam Myb-like DNA-binding domain 73 117 IPR001005 -
Ahy8g1221 253 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Ahy8g1221 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 71 IPR017930 -
Ahy8g1221 253 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 15 238 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1221 Ahy-Chr8 27591727 27593531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1221 15 234 MYB Transcription Factor Family AT5G59780 57.709 8.90e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy8g1221 Myb_DNA-binding 4.30E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1221 K09422 - tcc:18590753 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0415 18 3539273 3541014 Ahy8g1221 8 27591727 27593531 hybridization
Ahy13g0427 13 4436620 4438010 Ahy8g1221 8 27591727 27593531 PCT