Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1207 ATGGAGGAGAGTGTTGCGGCAGGGTCGTCATCATCGTCGTCAAGTTGTTCACGATGGAACCCAACGAAAGAGCAGATAAGCACGTTGGAGGAGATCTATAACCAGGGAGTGAGAACTCCAAACCCTAAAGAAATTAAGGAGATTATGGAGAGGCTCAAGGTTTATGGTCCCATTGAAGGTAAGAACGTCTTCTACTGGTTCCAGAATCACAAAGCCAGGCAGAGACAGAGGCAAAAAGATCATCATCAACAACAACTACGTCTTCAACAACACCATCATCATCATCCTTATTTCAATCGCTTTCTCAATTCCATCTCTCCCCCGATTTCTCCTACCGTGGTACGTAGCCCGGCATATGGGTTGGTACAGAGTGAAATTGGGCACTTTCAAAATCAACACTCAAATATGGTGGTAAGCCCAAGGACTGATCAAGCATTGCCTGTGATGAAGATGCCACCTCAGCCCATTAGCCCAAGGATTGAGGATGTTGTGCCAATGATGATCCCACCTGAGCCCATCCACCCAAGAACATTGGATCTGTTTCCGCAGCACCCAACTCTCACTTTGGCAGCAGGCAGGGCAAGACAGCAATCTAATCATGAACTTGCAAATCACAACTTCATTGACTTTTTCACTTCTCCAGGCCGGGACCAACCTTGA 660 0.4697 MEESVAAGSSSSSSSCSRWNPTKEQISTLEEIYNQGVRTPNPKEIKEIMERLKVYGPIEGKNVFYWFQNHKARQRQRQKDHHQQQLRLQQHHHHHPYFNRFLNSISPPISPTVVRSPAYGLVQSEIGHFQNQHSNMVVSPRTDQALPVMKMPPQPISPRIEDVVPMMIPPEPIHPRTLDLFPQHPTLTLAAGRARQQSNHELANHNFIDFFTSPGRDQP* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1207 219 CDD homeodomain 18 78 IPR001356 GO:0003677
Ahy8g1207 219 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 5 194 IPR044555 GO:0003700|GO:0099402
Ahy8g1207 219 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 5 194 - -
Ahy8g1207 219 SMART HOX_1 14 81 IPR001356 GO:0003677
Ahy8g1207 219 Gene3D - 16 85 - -
Ahy8g1207 219 Pfam Homeodomain 16 76 IPR001356 GO:0003677
Ahy8g1207 219 MobiDBLite consensus disorder prediction 1 22 - -
Ahy8g1207 219 SUPERFAMILY Homeodomain-like 12 82 IPR009057 -
Ahy8g1207 219 ProSiteProfiles 'Homeobox' domain profile. 12 77 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1207 Ahy-Chr8 27449177 27450802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1207 1 178 Wox Gene Family AT5G59340 40.212 1.68e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Ahy8g1207 Homeodomain 8.20E-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1207 - - aip:107612346 370.933