Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1190 ATGGCTGATCCAAGCCATGGTGGAAATCCGGCCACCGATTTCACAACTAGTAGGGAGGAAAATCCAGCTCCCTTTGATGAGAGTGATTTCTCTGCTGCAGCCCTAAAGTACATAGATGAAATGCTGATGGAAGAAGACATCGATGAAGAGTACAACATGTTCCAACATTCCTCGGCTCTCCTAGCAGCTGAGAAATCACTTTATGATGCCATTGGCCAGAGGTATCCTTCTTCTGCCTCTACTTTGTGGTCTTCAACTTCTTCTTCTATCCAGCATCATAATTACTACCCCAATGTGGAGAGCCCTGGGGATAGTTATAGCAGTACTAGTTCTGGCAGCACTTGTGGCACCACCAATACTAGCAGCTCTGCTGACTACTTCTGGAGCGGTTTTGATCTTTCTATGATTCCATTGATGCCAAACACTTTACCTTTTCCTGATACCTTTAATTTTCAGTCCAATCCATCCTCCACCACCCCCCAATCTAACCACAGAAGCGACTTCACTGCCACAAACAATAGTAGTGGATTAGGACAGGTGGTGATTAAGACTGAAGAAGTCGATTATGATTTAGAGGAAGAGGAAGAGGAAGAGGAAGAGGTCCAATTTCTTGCTGAGTCCATAGGAAGCAGTAGCAAGCAATCAGCATTGTACATGGATGACACTGAGCTATCCGAATTTTTTGATAAGGTACTTATTGGAGCTGGATTGGGAAGAGGGTCATCCCAAGCTGATGAAGGCATTCCCAAAGATTCTCGCGGTAAGAAGAGCCGTGCAAGGAAAAGAAATGACAAAAATGACGACGAAGTTATTGATCTGAGGTCATTGTTGATGCAATGTGCACAAGCAGTTTCTTCTGATAACCGTCCAATGGCAAAAGAGTTATTGATGCAGATTAAGCTGCATTCTTCTCCAACAGGTGATGCAACTCAGAGATTGTCCCATTGCTTTGTAAATGCTCTGGAAGCACGCATGGCAGGGACAGGTACACACATTCATAGTGCCTTATCCACAAAAAGGCCCTCTGCTTCTGATATGGTCAAGGCCTACAAAATGTTTACATTAGCTTGTCCATTTGACAAGTTTGGAATCAGGTTCTCAGTCAACTCAATTGGCGATTTGGCCATGGAAGGTGTCCAAACTCTTCACATTGTCGAATTTGGCATCCGCTATGGCTTCAAGTGGCCTGGACTTATGTATCGCCTATCCAGACTCCCCAGTGGGCCTCCGAAGCTTCGCATAACCGGGATAGAGTATCCACTGCCTGGTTTGAAGCTTGAGCAAACAGGGCAATGCTTAGCAAGGTATTGCGAGCGATTCAACATCCCTTTCGAGTTCAATGCTATTGTTGCAAAGAAATGGGAGAGAATCAAAGTTGAGGATCTCAAGATAAGGGAGAATGAGTTTGTAGCTGTGAATTGCATGTTTAGATTTGAGAATCTGCATGATGAGACAGTTGTGTTGGAGAATCCTAGAGATTCTGTTTTGGAGTTAATAAGGAAGGCTAATCCGAACATATTTGTACATGGCATTATAAATGGTAACTATGATGCTGCATTCTTCGTGACAAGGTTTAAGGAGGCAATGTTTCATTACTCAGCAATGTTTGACATGCTTGATAACACTGTTGCCCGTGATGATCCTATAAGGTTGATGTATGAGGAAGCTATATTTGGGAAGGAAGTGATGAATGTTGTGGCTTGTGAAGGGAATGAGAGGATTGAGAGACCACACAATTACAAGAAATGGCAGGTAAGGAACACAAGAGCAGGGTTCAGGCAGCTTTCATTGGATGAACAAATGATTGAGAAGTTTAAGGATATGTTGAGAAATGAAGGTTATCATAGAGATTTCATGCTTCATGCTGATGGCAAATGGCTTCTACAAGGTTGGAAGGGCAGAATCCTATATGCTTCTTCTTGTTGGGTACCAGCATAG 1938 0.434 MADPSHGGNPATDFTTSREENPAPFDESDFSAAALKYIDEMLMEEDIDEEYNMFQHSSALLAAEKSLYDAIGQRYPSSASTLWSSTSSSIQHHNYYPNVESPGDSYSSTSSGSTCGTTNTSSSADYFWSGFDLSMIPLMPNTLPFPDTFNFQSNPSSTTPQSNHRSDFTATNNSSGLGQVVIKTEEVDYDLEEEEEEEEEVQFLAESIGSSSKQSALYMDDTELSEFFDKVLIGAGLGRGSSQADEGIPKDSRGKKSRARKRNDKNDDEVIDLRSLLMQCAQAVSSDNRPMAKELLMQIKLHSSPTGDATQRLSHCFVNALEARMAGTGTHIHSALSTKRPSASDMVKAYKMFTLACPFDKFGIRFSVNSIGDLAMEGVQTLHIVEFGIRYGFKWPGLMYRLSRLPSGPPKLRITGIEYPLPGLKLEQTGQCLARYCERFNIPFEFNAIVAKKWERIKVEDLKIRENEFVAVNCMFRFENLHDETVVLENPRDSVLELIRKANPNIFVHGIINGNYDAAFFVTRFKEAMFHYSAMFDMLDNTVARDDPIRLMYEEAIFGKEVMNVVACEGNERIERPHNYKKWQVRNTRAGFRQLSLDEQMIEKFKDMLRNEGYHRDFMLHADGKWLLQGWKGRILYASSCWVPA* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1190 645 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 179 644 IPR005202 -
Ahy8g1190 645 MobiDBLite consensus disorder prediction 239 265 - -
Ahy8g1190 645 Pfam GRAS domain family 273 642 IPR005202 -
Ahy8g1190 645 ProSiteProfiles GRAS family profile. 264 643 IPR005202 -
Ahy8g1190 645 MobiDBLite consensus disorder prediction 1 26 - -
Ahy8g1190 645 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 86 IPR005202 -
Ahy8g1190 645 MobiDBLite consensus disorder prediction 147 174 - -
Ahy8g1190 645 PANTHER SCARECROW-LIKE PROTEIN 14 20 86 - -
Ahy8g1190 645 PANTHER SCARECROW-LIKE PROTEIN 14 179 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1190 Ahy-Chr8 27285012 27288256 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1190 27 644 GRAS Transcription Factor Family AT2G29060 44.025 6.82e-174 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy8g1190 GRAS 2.50E-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1190 - - aip:107614541 1198.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0383 18 3280368 3283747 Ahy8g1190 8 27285012 27288256 hybridization
Ahy8g1190 8 27285012 27288256 Ahy13g0468 13 4815347 4818714 PCT
Ahy13g0469 13 4820283 4823474 Ahy8g1190 8 27285012 27288256 PCT