Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1188 ATGAATGGTTTTCATTCATCATCTTCATCTTCTTCCGGAACCATCTCAAGTGGAGATTCCACTGAGTCTATTAAATATTCCAACAACATCCTCAGATACATAAGTGACATCCTCATGGATGAGGAAGATGACTTGGAGAACAAACCCTGTATGTTGCAACAGTGTTTGAGGCTCCAAGCTGCTGAAAAATCATTCTCTGAGGTGCTTGGAAATTCATCAAATTCTCCACCATCTCAAGGCTGTGATGAAAGCAACCAAGATGGTGATTACTGTCGCAGCACAAGCTTCGAAAGCTATAGCAGCTTTAACACTGATAATAGCTCTTATGAGTTTGATTGGGTCAATCTTGTTGGCGAGTATGAATCGTCTTTGCTACAAGCCTCTCTTCTTGGTGGATCTTACGGAACTCACTACCAGAACATGGTTCCATTGATCAACAATGAAGAGGGATCTAGTCCTGGAACAAGGGAAAAGAGAAGCTATCAGGTTGATGATGACGCTTCATATGAACAAGGCCGAAGAGGAAACAAGATCTCAGCTACTGTTTTCTCCGACGAGTCAGAGCCACCAGAGATTCTTGATGAAGTGCTGCGTATCCGGTTTGGAAGAAGTAAAAAATATTGTTGTGTTGAGCCCTTATCGAAAAATGACATGCTGAAGATGCAGAATGTTGGATCCAATTCGAAGACAGCACGTTCAAAGAACAGAAACAGCAACACAGATGCAACTGTGGATTTATGGACTTTGCTAACTCAATGTGCACAAGCAGTGGCAGACTATGATAAGAGGAATGCATATGATACACTCAAGAGGATTAGGCAGCATTCTTCACCGTCCGGCGATGGACTCCAGCGTATGGCGCATTACTTCGCCATTGGCCTCGAGACACGGTTGAATGCCGGAACACCGTCATATCCTCCCCTTGATATGGCATCTGCTGCAGATATGTTGAAAGCTTACAAACTCTACGTTACAGCTTCGCCTTTGCAGTGGATGACAAATAAATTGGCAACCCAAACAATCAAGAACCTGGTTCAGAATGAAAGCCGCGTTCACATTATTGACTTTGGAATTTGCTATGGTTTCCAGTGGCCCTGCCTTATCAAGTATCTGTCAGAGAGAAACGGGGCTATAAAGCTTCGTATAACCGGAATTGATCTTCCTCAGCCGGGTTTCCGGCCGACGGAAAGGGTCGAGGAGACCGGAAGACGGTTGGAGACTTTGTGTAAGAGGTACAAGGTGCCTTTCGAATACAACTGCATTGCACAGAAATGGGAAACAATCAGGCTTGAGGATCTTAAAATAGACAGGAATGAAGTGACAGTGGTTAACTGCTTTTACAGGCTGAAAAACCTGCCGGATGAAACTGTGTTAGTAAACAGTCCAAGAGATGCAGTGTTGAAGCTGATCAGGAACATTAATCCAAACATCTTCCTGCATGGGGTAGTCAATGGCTCTTATAGTGCACCGTTTTTCCCGACTCGGTTCAGGGAGGCTCTCTTCCACTTCTCATCGCAGTTTAATATGTTTGAAGCTAATTGCCCCCGCGAAGATGCAGAAAGGATGATACTTGAGAAAGGGATGATTGGAAGGGATGCTATCAATGTGATAGCTTGTGAGGGAGCAGAGAGAGTTGAAAGGCCAGAGAGCTACAAGCAATGGCAGATTAGGAACAAGAGAGCAGGCTTCAAGCAAATTCGGGTGGATCAGGAATTGGTGAATGAAATCAAGGGAATGGTGAAGAATGAGTATCATAGAGATTTTGTGGTTGACCAGGATGGCAACTGGGTTTTGCATGGCTGGAAAGGTCGTATTTTTCATGCTCTCTCTGTTTGGGTTCCTGCATAA 1848 0.4437 MNGFHSSSSSSSGTISSGDSTESIKYSNNILRYISDILMDEEDDLENKPCMLQQCLRLQAAEKSFSEVLGNSSNSPPSQGCDESNQDGDYCRSTSFESYSSFNTDNSSYEFDWVNLVGEYESSLLQASLLGGSYGTHYQNMVPLINNEEGSSPGTREKRSYQVDDDASYEQGRRGNKISATVFSDESEPPEILDEVLRIRFGRSKKYCCVEPLSKNDMLKMQNVGSNSKTARSKNRNSNTDATVDLWTLLTQCAQAVADYDKRNAYDTLKRIRQHSSPSGDGLQRMAHYFAIGLETRLNAGTPSYPPLDMASAADMLKAYKLYVTASPLQWMTNKLATQTIKNLVQNESRVHIIDFGICYGFQWPCLIKYLSERNGAIKLRITGIDLPQPGFRPTERVEETGRRLETLCKRYKVPFEYNCIAQKWETIRLEDLKIDRNEVTVVNCFYRLKNLPDETVLVNSPRDAVLKLIRNINPNIFLHGVVNGSYSAPFFPTRFREALFHFSSQFNMFEANCPREDAERMILEKGMIGRDAINVIACEGAERVERPESYKQWQIRNKRAGFKQIRVDQELVNEIKGMVKNEYHRDFVVDQDGNWVLHGWKGRIFHALSVWVPA* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1188 615 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 6 614 - -
Ahy8g1188 615 MobiDBLite consensus disorder prediction 67 87 - -
Ahy8g1188 615 ProSiteProfiles GRAS family profile. 237 613 IPR005202 -
Ahy8g1188 615 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 614 IPR005202 -
Ahy8g1188 615 MobiDBLite consensus disorder prediction 144 175 - -
Ahy8g1188 615 Pfam GRAS domain family 248 612 IPR005202 -
Ahy8g1188 615 MobiDBLite consensus disorder prediction 1 21 - -
Ahy8g1188 615 MobiDBLite consensus disorder prediction 152 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1188 Ahy-Chr8 27260507 27262843 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1188 26 614 GRAS Transcription Factor Family AT2G29060 44.481 3.55e-162 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy8g1188 GRAS 9.10E-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1188 - - adu:107461562 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0381 18 3256143 3258481 Ahy8g1188 8 27260507 27262843 hybridization