Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1187 ATGAATGGTTTTCACTATGAGGGTTCATCATATTCACCTGGAACCAGCTCAAGTGAAGATTCTGCTGAGTATAATAAATATTCCAACCCCATCCTCAGATACATAAGTGACATCCTCATGGAGGAGGAAGATGACTTGGAGAACAAACCCTGTATGTTGCAGCAGTGTTTGAAGCTCCAAGCTGCTGAAAAATCATTCTCTGAAGTGCTTGGAAATTCATCAAATTCTATACCCTCTCAAGGCTGTGATGAAAACAACCGAGATGGTGATTATGGTCGGACCACCAGCTTCGAGAGCTATAGCAGCTGCACCACTGATAATAACTCTTATGAGTCTGATTGGGTCAATCTTGTTGGTGAATATGAATCTTCTTTGCTACAAGCCCCTGATAATGACTCTTATGAGTCAGATTGGCTCAATCTTCTTGACTCCCCAAATGATGGATCTTCTGAAATTCACTACCAGAACATGGTGCTACTGACAAACAATGGAGAGGGATCTCGATCTGGAACAACAGGAACAAGGGAAAAGAGAAGTATTCAGGTTGATGATGATACTTCTTATGAACAAGGTCGAAGAGGAAGCAAGATCTCAGCTGTTTTCTCTGATGAGTCAGAGCCACCAGAGATTCTTGATGAAGTGCTGCGTGTTCAGATTGGAAGAAGTCAATGTTTATCTGGTGTTGAACCCTTACCAGAGAATGAGATATCGAAGAGGCAGAATGTTGACTCAGTTGGATCCAGTGGAAAGACGGCAAGATCAAAGAAAGGAAGCAGCAGAAATAGCAACACAGGTGCAACTGTGGATTTATGGAGTCTGCTAACTCGGTGTGCACAAGCAGTGGCAAACTATGATCAGAGGAATGCATATGATACACTCAAGCAGATTAGGCAACATTCTTCACCAGCTGGGGATGGAATGCAGCGTATGGCGCATTACTTCGCCATTGGCCTTGAGACACGGTTGAATGCCGGAACACCTTCATATCTTCCCCTTGATATGGCATCTGCTGCTGATATGTTGAAAGCTCACAAACTATATGTGACAGCTTCTCCTTTGCAGAGGATGACAAATACATTTGCAACCCAAACAATCATGAACCTAGTACAGAATGAAAGCTGTGTTCACATTATTGACTTTGGAATTTGCTATGGTTTCCAGTGGCCCTGCCTTATCAAGCGTCTGTCACAGAGAAATGTGCCTATAAAGCTTCGTATAACCGGAATTGATCTTCCTCAGCCGGGATTCCGGCCGGCAGAAAGGCTCGAGGAGACTGGTAGACGCCTGGAGAATTACTGTAAGAGGCACAATGTGCCTTTCGAATACAACTGCATTGCACAGAAATGGGAAACAATCAGGCTTGAGGATCTTAAAATAGACAGGAATGAAGTGACAGTGGTTAACTGCTTTTACAGGCTGAAAAACCTGCCGGATGAAACTGTGTTAGTAAACAGTCCAAGAGATGCAGTGTTGAAGCTGATCAGGAGCATTAATCCAAACATCTTCCTGCATGGGGTAGTCAATGGCTCCTATAGCGCGCCGTTTTTCCTGACACGGTTCAGGGAGGCACTCTTCCACTTCTCGTCACAATTTGATATATTTGAGGCTAATGTCCCCCGCGAAGATGCAGAAAGGATGATACTTGAGAAAGGGTTGATTGGAAGGGATGCTATCAATGTGATAGCTTGTGAGGGAGCAGAGAGAGTTGAAAGGCCGGAGAGCTACAAGCAATGGCAGATTAGGAACAAGAGAGCAGGCTTCAAGCAAATTCGGGTGGATCAGGAATTGGTGAATGAAATCAAGGGAATGGTGAAGAAAGAGTATCATAGAGATTTTGTGGTTGACCAGGATGGCAAGTGGGTTTTGCAGGGCTGGAAAGGCCGTATTCTTCATGCTCTCTCTGCTTGGGTTCCTGCTTAA 1920 0.4443 MNGFHYEGSSYSPGTSSSEDSAEYNKYSNPILRYISDILMEEEDDLENKPCMLQQCLKLQAAEKSFSEVLGNSSNSIPSQGCDENNRDGDYGRTTSFESYSSCTTDNNSYESDWVNLVGEYESSLLQAPDNDSYESDWLNLLDSPNDGSSEIHYQNMVLLTNNGEGSRSGTTGTREKRSIQVDDDTSYEQGRRGSKISAVFSDESEPPEILDEVLRVQIGRSQCLSGVEPLPENEISKRQNVDSVGSSGKTARSKKGSSRNSNTGATVDLWSLLTRCAQAVANYDQRNAYDTLKQIRQHSSPAGDGMQRMAHYFAIGLETRLNAGTPSYLPLDMASAADMLKAHKLYVTASPLQRMTNTFATQTIMNLVQNESCVHIIDFGICYGFQWPCLIKRLSQRNVPIKLRITGIDLPQPGFRPAERLEETGRRLENYCKRHNVPFEYNCIAQKWETIRLEDLKIDRNEVTVVNCFYRLKNLPDETVLVNSPRDAVLKLIRSINPNIFLHGVVNGSYSAPFFLTRFREALFHFSSQFDIFEANVPREDAERMILEKGLIGRDAINVIACEGAERVERPESYKQWQIRNKRAGFKQIRVDQELVNEIKGMVKKEYHRDFVVDQDGKWVLQGWKGRILHALSAWVPA* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1187 639 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 638 IPR005202 -
Ahy8g1187 639 MobiDBLite consensus disorder prediction 177 191 - -
Ahy8g1187 639 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 2 638 - -
Ahy8g1187 639 MobiDBLite consensus disorder prediction 237 263 - -
Ahy8g1187 639 MobiDBLite consensus disorder prediction 162 194 - -
Ahy8g1187 639 MobiDBLite consensus disorder prediction 228 263 - -
Ahy8g1187 639 ProSiteProfiles GRAS family profile. 261 637 IPR005202 -
Ahy8g1187 639 MobiDBLite consensus disorder prediction 162 176 - -
Ahy8g1187 639 MobiDBLite consensus disorder prediction 1 23 - -
Ahy8g1187 639 Pfam GRAS domain family 272 636 IPR005202 -
Ahy8g1187 639 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1187 Ahy-Chr8 27255793 27258323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1187 31 71 GRAS Transcription Factor Family AT1G07530 60.976 8.85e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy8g1187 GRAS 1.80E-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1187 - - aip:107612146 1263.83