Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1177 ATGAGTTTTGTTTTCAGAGGGAGTAGGGAAGATATTGAAAGTGGTTTTCCAGATTATGTTCCTGAAAGATCCTTGATGCGTATTCATCCGGCTCGACCAATTAGTAGCAATTCTCTGGCTTTTCTCACCACAGTTATTGTGTTATTCATGCTGCTGAACTCTCCTCAGATGGCACATTATTTTATGCTATGGCTTGTGCTTGCTGTTTTTGCGATGGCTACAAGCTTGAGGATGTACACAGCTTGTCAGCATCTTCAAGCTCAGGCCAGGGCTCATGCAGCAGCAGCAACTGGATTGCTTAGCCATACCGAATTATGGCTTAATGTGCCACCATCCATAGCAATTGCAACTAGAGGACAATTGCAGGGGCTTAGGCTTCAGCTTGCACTACTTGATCGTGAATTCGATGAACTAGGGGTAGATTATGATGCTTTGAGAGCTCTTGACTCTGATGCTGTTTCGACTACTACTTCCATGACTGAGGAAGAGATAAATGCCTTACCCGTTCACAACTATAAAGTTGCAGTTCCAACAAAGGATTGCTCAGCAGGGTTGGGATCCTCTTCAAGTGCTGCTGAGAATAAGCAAGCCTGCGAAGGAGCCGAGGGAAATAACCAAGGCCCGGAAGATGAGCTAACATGTACCATATGCTTGGACCAAGTTAACGGTGGCGAACTAGTCCGTAGCCTGCCATGCTTGCATCAGTTTCATGCCAACTGCATTGATCCATGGCTCCGGCAGCGAGGAACATGTCCGGTGTGCAAATTTAAGATGGGTTTGGAATGGCGAGGAAACAGGGAGACTGAGACTGATTCCGACGGTTCAGATATTGCTTAG 837 0.4636 MSFVFRGSREDIESGFPDYVPERSLMRIHPARPISSNSLAFLTTVIVLFMLLNSPQMAHYFMLWLVLAVFAMATSLRMYTACQHLQAQARAHAAAATGLLSHTELWLNVPPSIAIATRGQLQGLRLQLALLDREFDELGVDYDALRALDSDAVSTTTSMTEEEINALPVHNYKVAVPTKDCSAGLGSSSSAAENKQACEGAEGNNQGPEDELTCTICLDQVNGGELVRSLPCLHQFHANCIDPWLRQRGTCPVCKFKMGLEWRGNRETETDSDGSDIA* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1177 278 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 189 260 IPR013083 -
Ahy8g1177 278 SMART ring_2 214 254 IPR001841 -
Ahy8g1177 278 ProSiteProfiles Zinc finger RING-type profile. 214 255 IPR001841 -
Ahy8g1177 278 PANTHER TARGET OF ERK KINASE MPK-1 1 276 - -
Ahy8g1177 278 CDD RING-H2_PA-TM-RING 213 255 - -
Ahy8g1177 278 Pfam Ring finger domain 213 255 IPR001841 -
Ahy8g1177 278 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 276 - -
Ahy8g1177 278 SUPERFAMILY RING/U-box 209 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1177 Ahy-Chr8 27157540 27160861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1177 1 278 C3H Transcription Factor Family AT3G55530 66.071 4.07e-119 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1177 K16283 - gmx:100805406 384.415