Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1145 ATGTTAAGTCACACTTCACAGTTGGCAACTGATTTCTCTTGTCTCCCTTCAAACACTGTTTCCTCCTCCATCTACTTTTATTTCTTGATAAATCTAAAAAAGCACTGTGTCTTTTTGCACACACTACCTCCTTTGATCACTTTCTTCTTCTGCATCATGACAAATAATCCTTACTACTTGAACAACAATGGTTATTGGTTCGACCTTAATTCTCCAAGCAGCACCTATGTTTTTGGTTCCAATCACGAGTCTCCACCGAGAAGAGAAGCGCTTCCTCTCCTGAATAAGCTAAGCCCTAGCAGGAGTACGAGTAGTAGGCCTCAAGATCTGGAATCTTCGTTTGGTGCCATGGAAGTGAAGGAGAAGCACAAGAGAGGAGATGACGGCGATGAGAGTGTGACGGTGGCTTTGCACTTAGGGCTTCCAGAAACAAGAAGTAAGAATATGACATGCGAAGAAGAAGTTTCAGCAGCGTCAGTGTCACAAGAACAAGAAGAAGGAGGAGGAGGAGGAAGAGGTTCTGATTCGAAATCGATGAATCGAGGTCAATATTGGATCCCAACACCGGCTCAGATTCTGATTGGTCCAACACAGTTCTCTTGCCCCCTTTGTTTCAAGACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCACAATATAGGAAGGGGCCAGAATCACTAAGGGGAACACAACCAACAGCAATGCTTAGGCTTCCATGCTACTGCTGTGCACCAGGGTGTAAGAACAACATTGATCATCCAAGAGCCAAGCCTCTCAAAGATTTCAGAACCCTCCAAACACACTACAAGAGGAAGCATGGAATCAAGCCTTTCATGTGCAGGAAGTGTTGCAAGGCCTTTGCTGTGAGAGGTGATTGGAGGACTCATGAGAAGAACTGTGGCAAGCTTTGGTATTGTTCTTGTGGCTCTGATTTCAAGCATAAGAGGTCTCTCAAGGATCATATCAAGGCCTTTGGGAATGGTCACAAGGCTTATGGCATTGATTCTCTTGATCAAGATGATAATGAACCTGGCTCTGAAATTGACCAAGAAAATGATCATCTTTCTAATTCTACTACTCATCATCATCATACTTGA 1113 0.4385 MLSHTSQLATDFSCLPSNTVSSSIYFYFLINLKKHCVFLHTLPPLITFFFCIMTNNPYYLNNNGYWFDLNSPSSTYVFGSNHESPPRREALPLLNKLSPSRSTSSRPQDLESSFGAMEVKEKHKRGDDGDESVTVALHLGLPETRSKNMTCEEEVSAASVSQEQEEGGGGGRGSDSKSMNRGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAYGIDSLDQDDNEPGSEIDQENDHLSNSTTHHHHT* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1145 370 PANTHER TESTA 1 PROTEIN, PUTATIVE-RELATED 69 358 - -
Ahy8g1145 370 MobiDBLite consensus disorder prediction 79 131 - -
Ahy8g1145 370 MobiDBLite consensus disorder prediction 96 111 - -
Ahy8g1145 370 ProSitePatterns Zinc finger C2H2 type domain signature. 201 221 IPR013087 -
Ahy8g1145 370 PANTHER ZINC FINGER PROTEIN WIP2 69 358 IPR043584 GO:0003700|GO:0010468
Ahy8g1145 370 Gene3D Classic Zinc Finger 280 356 - -
Ahy8g1145 370 ProSiteProfiles Zinc finger C2H2 type domain profile. 199 226 IPR013087 -
Ahy8g1145 370 SUPERFAMILY beta-beta-alpha zinc fingers 265 303 IPR036236 -
Ahy8g1145 370 MobiDBLite consensus disorder prediction 341 370 - -
Ahy8g1145 370 MobiDBLite consensus disorder prediction 115 131 - -
Ahy8g1145 370 Gene3D Classic Zinc Finger 198 221 - -
Ahy8g1145 370 MobiDBLite consensus disorder prediction 148 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1145 Ahy-Chr8 26682389 26684302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1145 133 361 C2H2 Transcription Factor Family AT3G57670 69.884 3.23e-128 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy8g1145 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0340 18 2921200 2923113 Ahy8g1145 8 26682389 26684302 hybridization
Ahy8g1145 8 26682389 26684302 Ahy13g0561 13 5832192 5834515 PCT
Ahy13g0561 13 5832192 5834515 Ahy8g1145 8 26682389 26684302 PCT