Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1141 ATGAATTCAAACAACTGGCTATCATTCCCACTCTCTCCAACTCATTCATCACTACCACCTCTGGGAACATTGGTGAATGACAACATCGATAACTCCTTTCAAAATCATGATTGGAATCTGATAAACAATGAGAGCAGCAGCAGTAGTCAAGTTCCGAAGGTAGCAGATTTTCTTGGTGTGAGTAACAAGTCTGAGAATGAGTCAGATCTTGCAGGCTTGGATGATGACTCGGATTACTTGTTCAACGCAAACACTACCCTTTTGCCTCTGCAAGTTCTTTCTAATAATAGCAGCTATGACTACCAACAACAACAAGAAGAGAGTAACAACAATAACAGTAGTAATCTTCATCAGTCACTCACACTCTCCATGGCTACTGCCAACAAGGACTCCACTACTTCCGACAACACTTGTGCCACTGCCATCGTTGAAGCTTCAGCCGCTGCCCCGAGAAGAGCTTTGGATACCTTTGGTCAGAGAACTTCTATTTATCGTGGTGTAACAAGACATAGGTGGACTGGAAGGTATGAAGCTCATCTATGGGATAATAGTTGTAGAAGGGAGGGTCAATCAAGAAAAGGTCGCCAAGTGTATTTGGGTGGATACGACAAAGAAGAGAAAGCAGCAAGGGCTTATGATTTAGCCGCACTTAAGTACTGGGGAACTTCCACCACTACCAACTTTCCCATGAGTAACTACGAGAAAGAGTTGGAAGACATGAAGCACATGACAAGACAGGAATTCGTAGCAGCCATTAGAAGGAAGAGCAGTGGATTCTCAAGGGGAGCATCAATGTATCGTGGAGTCACAAGGCATCACCAACATGGAAGATGGCAAGCAAGGATAGGAAGAGTGGCCGGAAACAAAGATCTGTACTTGGGAACTTTCAGTACCGAAGAAGAAGCTGCAGAAGCTTATGACATTGCAGCCATAAAGTTCAGAGGTCTAAACGCAGTTACAAACTTCGACATGAGTCGCTACGATGTGAAAGCCATTCTTGAAAGCAACACACTTCCCATTGGAGGAGGTGCTGCAAAACGCTTAAAGGAAGCTCAGGCTCTAGAATCTTCTAGAAAGACTAATAGAGATGACATCATAGCATTGGGATCCACCTTTCCATACGGATCTTCTTCATCAACCACAACCGCCACCAGATTTTTGCAGCAAGCAACTGCTTATCCTTTAATGCCACAGCACCACTTCGATCATCATCATCATCAACCATTGTTAACGTTACAGAACCATGACATATCACAACATTACAACACTGATCCTGCTTCTTCGTTTCATCATACTAATTCTTATCTCCAAAGGCAGCTTCAACTCCATCATCAACAGCATCAAACTACTTCTTCTTCTTCATCTTCATACAATAATAATAATGCTCAATTTTACAGCAGCTACCTTCAGGGATTCATGGACCATAACAATGGGAATGGAGGAGGAGGTTACCATCATCATCATCATAACACTAATAATATGCTTGGGATTGGAATGGGTTCTAATAATAACTCCTCATCGAGCAATGCCACAGCAGTGGGATCAGCGGAGGAGCTTGCTCTTGTGAAGGTTGATTATGACATGCCTTCCGCGGGATACGGCGGCTGGTCGCCGGCAGCAGACACCATGCACGGTTCAAACGGCGGTGGTGTCTTCACAATGTGGAATGAATGA 1674 0.4397 MNSNNWLSFPLSPTHSSLPPLGTLVNDNIDNSFQNHDWNLINNESSSSSQVPKVADFLGVSNKSENESDLAGLDDDSDYLFNANTTLLPLQVLSNNSSYDYQQQQEESNNNNSSNLHQSLTLSMATANKDSTTSDNTCATAIVEASAAAPRRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGTSTTTNFPMSNYEKELEDMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKTNRDDIIALGSTFPYGSSSSTTTATRFLQQATAYPLMPQHHFDHHHHQPLLTLQNHDISQHYNTDPASSFHHTNSYLQRQLQLHHQQHQTTSSSSSSYNNNNAQFYSSYLQGFMDHNNGNGGGGYHHHHHNTNNMLGIGMGSNNNSSSSNATAVGSAEELALVKVDYDMPSAGYGGWSPAADTMHGSNGGGVFTMWNE* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1141 557 ProSiteProfiles AP2/ERF domain profile. 163 229 IPR001471 GO:0003700|GO:0006355
Ahy8g1141 557 CDD AP2 162 231 IPR001471 GO:0003700|GO:0006355
Ahy8g1141 557 PRINTS Ethylene responsive element binding protein signature 164 175 IPR001471 GO:0003700|GO:0006355
Ahy8g1141 557 PRINTS Ethylene responsive element binding protein signature 305 325 IPR001471 GO:0003700|GO:0006355
Ahy8g1141 557 ProSiteProfiles AP2/ERF domain profile. 265 323 IPR001471 GO:0003700|GO:0006355
Ahy8g1141 557 CDD AP2 264 325 IPR001471 GO:0003700|GO:0006355
Ahy8g1141 557 SUPERFAMILY DNA-binding domain 264 325 IPR016177 GO:0003677
Ahy8g1141 557 SMART rav1_2 163 235 IPR001471 GO:0003700|GO:0006355
Ahy8g1141 557 SMART rav1_2 265 329 IPR001471 GO:0003700|GO:0006355
Ahy8g1141 557 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 556 - -
Ahy8g1141 557 Pfam AP2 domain 266 315 IPR001471 GO:0003700|GO:0006355
Ahy8g1141 557 Pfam AP2 domain 163 221 IPR001471 GO:0003700|GO:0006355
Ahy8g1141 557 Gene3D AP2/ERF domain 163 231 IPR036955 GO:0003700|GO:0006355
Ahy8g1141 557 Gene3D AP2/ERF domain 265 325 IPR036955 GO:0003700|GO:0006355
Ahy8g1141 557 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 5 556 - -
Ahy8g1141 557 SUPERFAMILY DNA-binding domain 162 231 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1141 Ahy-Chr8 26643053 26646116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1141 1 557 AP2-EREBP Transcription Factor Family AT1G51190 59.543 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Ahy8g1141 AP2 9.90E-13 CL0081