Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1108 ATGAACAATAGTTTCAATCAGCACAAGATGATGTGTTATAAGCGCAAAAGAGCTCTGAAGACTACATCGACCCCTGGACGTGAAGGTCTAAGACCTAGCCATTTGACAAGGGCTACTGTAGGGCAACAATTGATTTCGGAATCAGATGATAAACAGGAACTTGCAGAAGAGAAGAAGATTGGGAAAGATGAAACAGAAAATGGAAATGTTGATGGTGAGAATGAGATTGATGAAGATGTTGAGGATGTAGGAAATGAAGATGGTGATGATGAAGGTGGCAAAGAAGAGCAGGTTGGGAGAAGACGTTACGATCTTCGGAATCGTCCAGATGTCCGCAGGTCCTCCATGGCAGAATGTAAGATCCAACCAAGATCTCCACAAAGAGTGCTACATCAAGGCATGGGCACTAAGGTTAAAAAGGGTGTAAAGAAGGGTGGATCACGAGTGCAGAAGCGTTGTTGGTTAAGGCCTGCATATTCTGATGATTCCCGTATTGTGGATGAGCTGAACCAATATCCTGCTATTCCATGGGGTCATGGGGACAGCAGACCTTGCCAACCATGGCTTTTTGGAGGATTAGACATGCATGGGATAACAACTTGGGGATTAAATGTTGCTGCCTCAGGTTGGGTTCATGAAGAAGATGCTTTTTCCACCTCGGTAACTGGGGTTCAAACTGCTGGACCAAGCTCTAAGGGTGGGGCAGATATCCAACCTTTGCAGGTCGTCGATAGTGCCAGTTTTGATGACATAGGGGGGCTCTCTGAGTACATTGATGCTTTGAAGGAAATGATTTTCTTTCCCTTGTTGTATCCCGAATTCTTTGCAAGTTATCATATCACACCACCTAGGGGGGTGTTGTTATGTGGCCCCCCTGGCACAGGCAAAACTTTGATTGCAAGAGCTCTGGCTTGTGCTGCTTCAAAAGCTGGCCAGAAGGTCAGCTTTTACATGCGCAAAGGAGCAGATGTGCTAAGCAAATGGGTTGGTGAGGCTGAAAGACAACTGAAACTACTTTTTGAAGAAGCTCAAAAGAACCAACCTTCTATCATATTCTTTGATGAAATAGATGGACTTGCACCTGTGAGGTCTAGCAAGCAAGAGCAGATTCATAATTCCATTGTTTCCACCTTGCTAGCTTTGATGGACGGTCTTGATTCTCGTGGACAAGTTGTTCTGATTGGAGCCACCAACAGGATTGATGCCGTTGATGGAGCCTTGCGGCGCCCTGGTAGATTTGATCGGGAATTTAAGTTTCCATTGCCTGGTTGTAAGGCACGTTCTGAAATATTAGACATCCACACACGCAAGTGGAAACATGCTCCTTCAAATGAACTGAGAATGGAACTTGCATCTAGTTGTGTAGGATATTGTGGTGCCGACCTAAAGACCCTCTGTACTGAAGCTGCTATTTGTGCATTTCGTGAAAAATATCCACAAGTCTATACTAGTGATGACCAATTTCTCATAGATGTTGATTCAGTCAAGGTTGAAAAGTATCACTTTACTGAAGCTATGTCAACAATTACTCCTGCTGCTCATAGGGGTGCAATTGTGCACTCTAGGCCATTGTCTCTAGTTGTTCGACCATGTCTTCGCAGGCATCTAGAGGCAGCCATGGGTATTGTATCTGATATTTTCCTTCCAGTTTCAGTTGCATCAGAATTTATTAAACAATCAACGCATTCCTTTGGGCGCGCAATTCCACTTGTGTATCGACCTAGACTTCTACTTTGTGGAAGTGAAGGTACTGGGCTGGATCATCTTGGGCCTGCAGTTTTACATGAACTGGAAAAGTTTCCTGTTTTTTCATTAGGTATTTCAGTTCTTGTATCAGATTCAAGTGCAATAACACCAGAGGAGGCATTGATTCATATATTTAATGAAGCTAGACGAACAATACCATCAATTCTCTATTTACCACAGTTTGATGTGTGGTGGGAAACTGCACATGAACAGCTCCGGGCTGTTCTCCGAACCTTACTAGAAGAATTGCCATCTGACTTGCCTATATTACTGTTTGGAACATCATCAGTCCAGCTTGCTGAAGTTAAAGAAGTGCCTATTTCAGTTTTCCCTCATGATTCAGTTTATCAACTGAACATACCATCAGCCGAAGATAGGATGCTGTTTTTTAATGATTTAGTGGAAGCTGTTTTGTCGGTCTTTTCTGGGATAATGAACAAGAAACCCCTGGACACAGGATGCTTTTCTGAACTTCCCAAGGCACCTAAACTAGCAAGTGGTCCAAAGGCATCCGAACTTAAAGCAAAGGTGGAAGCTGAGCAACATGCACTCCGCAGATTGCGGATGTGCCTTAGAGATGTTTGTAACAAGATATTATATGACAAGCGATATAATCTCTTCCATTATCCAGTCTCAGACAAAGATTCTCCTAATTATCACTCAATTATCCAGAACCCGATGGACATGGTAACCATGTTACAGCGTGTTGATAATGGCTGGTATATTACACGTTCTGCATTCCTGCAGGACATCGATCTTATTGTTTCCAATGCAAAGGTTTACAATGGAGAGGATTACAACGGTGCTCGGATTGTGAGTAGAGCTTGTCAGCTCCGTGATGTGGTGCATGGGATGATCTCACAGATGGATCCAGCATTAGTTGCATACTGTGACAAGATTGCTGCCCAAGGTGGCCCGGTTCATTTGTCTAATGAATTAAGGGGGTCTACATTCCCTGCTACTCCCGTTGTACAACTGGGAACTGCCACTAGATTGAGTGCTCGACTTCATAATGTCGAACCAGAGGTTAGTGTGGATCAGAGCTATGAAGCATTGAAGCACACTAAGAAGAGTTCTGATGTTGCACGTGGAGCAAAAGATAAGTCAGGACAAGAGCCTTTACCATCCAAGAGTCAAACCCAATCAACTGATGAGAATTTGCATGGAACGGGTACAAATGAAAGTGTTCATGGTAGCAGTCTTGAAGACGCCACGATATCAGATACTGAACTTTCAACAAGATTGCAGTCTATTAAGCAGATTTTTGTCGAGCGCAGCGACGGTTACAGCATTCCACAGCTCGAACAGCTCTACTCAAGAATCATGAAGAGGGTTTCCCAAACCAAACTTGATTGCAAGACCTCAGCTGTGAGTTTTTTATTAAACTTTGTTGAGGATGGTGCAAATTTTTAA 3159 0.4349 MNNSFNQHKMMCYKRKRALKTTSTPGREGLRPSHLTRATVGQQLISESDDKQELAEEKKIGKDETENGNVDGENEIDEDVEDVGNEDGDDEGGKEEQVGRRRYDLRNRPDVRRSSMAECKIQPRSPQRVLHQGMGTKVKKGVKKGGSRVQKRCWLRPAYSDDSRIVDELNQYPAIPWGHGDSRPCQPWLFGGLDMHGITTWGLNVAASGWVHEEDAFSTSVTGVQTAGPSSKGGADIQPLQVVDSASFDDIGGLSEYIDALKEMIFFPLLYPEFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAVDGALRRPGRFDREFKFPLPGCKARSEILDIHTRKWKHAPSNELRMELASSCVGYCGADLKTLCTEAAICAFREKYPQVYTSDDQFLIDVDSVKVEKYHFTEAMSTITPAAHRGAIVHSRPLSLVVRPCLRRHLEAAMGIVSDIFLPVSVASEFIKQSTHSFGRAIPLVYRPRLLLCGSEGTGLDHLGPAVLHELEKFPVFSLGISVLVSDSSAITPEEALIHIFNEARRTIPSILYLPQFDVWWETAHEQLRAVLRTLLEELPSDLPILLFGTSSVQLAEVKEVPISVFPHDSVYQLNIPSAEDRMLFFNDLVEAVLSVFSGIMNKKPLDTGCFSELPKAPKLASGPKASELKAKVEAEQHALRRLRMCLRDVCNKILYDKRYNLFHYPVSDKDSPNYHSIIQNPMDMVTMLQRVDNGWYITRSAFLQDIDLIVSNAKVYNGEDYNGARIVSRACQLRDVVHGMISQMDPALVAYCDKIAAQGGPVHLSNELRGSTFPATPVVQLGTATRLSARLHNVEPEVSVDQSYEALKHTKKSSDVARGAKDKSGQEPLPSKSQTQSTDENLHGTGTNESVHGSSLEDATISDTELSTRLQSIKQIFVERSDGYSIPQLEQLYSRIMKRVSQTKLDCKTSAVSFLLNFVEDGANF* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1108 1052 MobiDBLite consensus disorder prediction 70 92 - -
Ahy8g1108 1052 Pfam Bromodomain 774 847 IPR001487 GO:0005515
Ahy8g1108 1052 Gene3D - 422 507 - -
Ahy8g1108 1052 Pfam ATPase family associated with various cellular activities (AAA) 286 421 IPR003959 GO:0005524|GO:0016887
Ahy8g1108 1052 PRINTS Bromodomain signature 798 814 IPR001487 GO:0005515
Ahy8g1108 1052 PRINTS Bromodomain signature 814 832 IPR001487 GO:0005515
Ahy8g1108 1052 PRINTS Bromodomain signature 832 851 IPR001487 GO:0005515
Ahy8g1108 1052 Gene3D - 758 886 IPR036427 GO:0005515
Ahy8g1108 1052 Gene3D - 245 514 IPR027417 -
Ahy8g1108 1052 Pfam AAA+ lid domain 449 485 IPR041569 -
Ahy8g1108 1052 MobiDBLite consensus disorder prediction 925 987 - -
Ahy8g1108 1052 SUPERFAMILY Bromodomain 762 878 IPR036427 GO:0005515
Ahy8g1108 1052 MobiDBLite consensus disorder prediction 954 987 - -
Ahy8g1108 1052 MobiDBLite consensus disorder prediction 929 949 - -
Ahy8g1108 1052 PANTHER AAA DOMAIN-CONTAINING 10 1030 IPR045199 -
Ahy8g1108 1052 ProSitePatterns AAA-protein family signature. 391 409 IPR003960 GO:0005524|GO:0016887
Ahy8g1108 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 246 510 IPR027417 -
Ahy8g1108 1052 SMART bromo_6 766 873 IPR001487 GO:0005515
Ahy8g1108 1052 SMART AAA_5 282 423 IPR003593 -
Ahy8g1108 1052 MobiDBLite consensus disorder prediction 49 69 - -
Ahy8g1108 1052 MobiDBLite consensus disorder prediction 16 102 - -
Ahy8g1108 1052 CDD AAA 282 421 - -
Ahy8g1108 1052 ProSiteProfiles Bromodomain profile. 789 851 IPR001487 GO:0005515
Ahy8g1108 1052 CDD Bromo_AAA 766 876 - -
Ahy8g1108 1052 PANTHER BNAC08G44480D PROTEIN 10 1030 - -
Ahy8g1108 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 570 779 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1108 Ahy-Chr8 26131183 26138748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1108 234 486 Calmodulin-binding Proteins AT3G56690 36.502 3.68e-42 166