Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1103 ATGGAGCTCGGGATTGATGGCTCCATTAATGGTGAGACAATAGCACATGCTACCATAGGAGAAGTTAGCAGTAGCTTTGTTGATGAAGATAAAATTGCTAGCTGTTCCTTTGATCCAGCTTACAAACAAGATCAAGATGGTAATATAACACAAGATTCTTCTGGAGGGGACACAATCCCCTCAGCAATTCCTGCTGTATCGGTTGTGTCAGCTGATGAGCCATACGTGGGTCAGGAGTTTGATTCGGAAGCAACAGCGCATGCATTTTATAATGCATATGCCACGCGTGTTGGATTTGTCATACGTGTAAGTAAGCTCTCACGGTCAAGGCGTGATGGTTCTGCAATTGGACGTGCTCTTGTTTGCAACAAAGAGGGTTACAGAATGCCCGATAAGCGTGAAAAAATTGTAAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTTAGTTCCGGTAAATGGGTTGTCACAAAGTTTGTAAAGGAGCACACACACCCTTTGACACCTGGAAAAGGCAGAAGGGATTGCATTTATGAACAATATCCGAATGAACATGATAAAATTCGAGAACTATCTCAGCAATTGGCTATAGAGAAAAAACGGTGTGCAGCTTATAAAAGGCAACTTGAATTGTTATTTGAACACATTGAGGAGCATAATAATAGTCTTTCAAAGAAAATACAGCACATAGTAGGCAATGTGAAGGAGATTGAAGCTGAAGAACAACAGCGTCATAGATAG 762 0.4199 MELGIDGSINGETIAHATIGEVSSSFVDEDKIASCSFDPAYKQDQDGNITQDSSGGDTIPSAIPAVSVVSADEPYVGQEFDSEATAHAFYNAYATRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLAIEKKRCAAYKRQLELLFEHIEEHNNSLSKKIQHIVGNVKEIEAEEQQRHR* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1103 253 Pfam FAR1 DNA-binding domain 89 175 IPR004330 -
Ahy8g1103 253 Coils Coil 195 215 - -
Ahy8g1103 253 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 251 - -
Ahy8g1103 253 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 2 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1103 Ahy-Chr8 26103304 26105762 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy8g1103 FAR1 7.40E-31 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1103 - - gmx:100806900 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0307 18 2541887 2544294 Ahy8g1103 8 26103304 26105762 hybridization
Ahy8g1103 8 26103304 26105762 Ahy13g0599 13 6246846 6249130 PCT
Ahy13g0599 13 6246846 6249130 Ahy8g1103 8 26103304 26105762 PCT