Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1097 ATGAATTCATCTTCTCTATTACCATCAGAAGGAGCAGCACTACCAGAAGAACTACTATTCCCTGCAGCAGTAGCAACACCGTCATCAGACTTCATGGTTCCTAATATTGTACTCAATAGTTTTTGCGTGGGAATTAATAATGACAATGAGAAGAAGAAGGACAGTGAGAGACCTATCTCTGCACAAAGCATAGCGGCAAGGGAGAGGAGAAAAAAGATCACAGATAAGACACAAGAGTTTGGAAAGTTGGTTCCTGGTGGACCAAAGATGAACACAGCTGAGATGCTCTATGCAGCTTCTAAATATGTGAAGTACCTTCAAACTCAAATTGGTATGCTTCAACTTATGAACACACTCCAGAAAGAAGATGAGGTTGCTCCTCCAAGTGAAGATCTATGTGCTCTTATTACTTCTCCCTGTGTTCAAGAGAAGCTTTATTCTGAGGAACTATGCTTTGTCCCTAAAGACTTTGTTACAGCTTTGACAAATCAGCGTGATATTCGATCAAAGCCTACCATCTTTAAGGATCTTAAAGAGTTGATTGAAACAAACAATGTGCAGAAGAAAGCATAG 573 0.3997 MNSSSLLPSEGAALPEELLFPAAVATPSSDFMVPNIVLNSFCVGINNDNEKKKDSERPISAQSIAARERRKKITDKTQEFGKLVPGGPKMNTAEMLYAASKYVKYLQTQIGMLQLMNTLQKEDEVAPPSEDLCALITSPCVQEKLYSEELCFVPKDFVTALTNQRDIRSKPTIFKDLKELIETNNVQKKA* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1097 190 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 31 177 - -
Ahy8g1097 190 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 31 177 - -
Ahy8g1097 190 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 57 106 IPR011598 GO:0046983
Ahy8g1097 190 SMART finulus 63 112 IPR011598 GO:0046983
Ahy8g1097 190 Pfam Helix-loop-helix DNA-binding domain 63 107 IPR011598 GO:0046983
Ahy8g1097 190 Gene3D - 54 126 IPR036638 GO:0046983
Ahy8g1097 190 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 56 118 IPR036638 GO:0046983
Ahy8g1097 190 MobiDBLite consensus disorder prediction 49 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1097 Ahy-Chr8 26032477 26034085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1097 29 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 44.872 2.27e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy8g1097 HLH 2.10E-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1097 - - ahf:112705146 372.474