Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1090 ATGCACCTAAGCCCTTACAAAAAAACACACTTTAATAACAACATTCCTCATCTTCATCATCATCATCATCATATCCATGATGATGATGCTTCACCCATAGACATGCATAACAACACCACCACCACCAACTCAACCAGCCTGTGTTCTTCCGATTCCGGTGAGCCATGTGAGGACGGTAAATGGGCTTGCAAGCTCCTCAAGGAGTGTGCCATCGCCATCTCACAAAGAGACTCCACCAAAATCCACCACCTTCTATGGATGCTCAACGAACTCGCTTCCCCTTACGGCGACTTGGATCAGAAGCTCGCCTCTTACTTCTTGCAAGCCTTGTTCTGCAAGGCCACGGAATCCGGCCACCGTTGCTACAAGACTCTCTCAACCGTCGCTCAAAAGAGCAACAACTTCGACTCCGCCAGAAAATTGATACTCAAATTCCAAGAAGTCTCCCCTTGGACAACCTTCGGACACGTGGCAGCCAACGGAGCAATACTCGAGGCCTTGGAAGGCGAGTCCAACCTCCATATAATTGACATAAGCAACACTCTTTGCACCCAGTGGCCAACGCTGTTCGAAGCCCTGGCCACCAGGAATGACGAAACTCCTCGTCTCAGACTTACCGTGGTGGCGCTCAGCTCCACCACAGTAAGTTCTGTTATGAAGGAGGTTGGACAGAGAATGGAGAAGTTCGCGAGACTCATGGGAGTTCCCTTTGAATTCAACGTAATCAACGGTCTCGATCGCCTGGGAGAGCTCACGAAGGAATCGTTAGGGATTACAAACGACGAAGCCATCGCCGTGAATTGCATCGGAGCGTTGAGGAGGATCGAGGTTGAAGAAAGAGAATCGGCAATTCGCATGTTCAGATCGCTTAATCCAAAAGTGGTAACCGTCGTTGAGGAAGAAGCCGATTTCAGCAGCAATCGAAACGATTTCGTTCAGTGCTTTGAAGAGTGCCTTAAATTCTACGGCTTATACTTCGAGATGTTGGAAGAGAGTTTTCCATTAACGAGCAACGAAAGGTTGATGTTAGAGAGAGATTGTTCTCGAAGCATAGTTAGGGTTTTGGCTTGTGGCGGTGGTGATGAACAAAACAATAATAAAGAAGAGTTTGAAGATTGTTGTGAGAGAAGAGAGAGAGGGAGACAGTGGTGTGAGAAGCTGAAGAAGGAGTTTTCAGGCGCAAAGTTCAGCGATGATGTGGTTGACGATGTTAAAGCATTGCTCAAGAGATACCGTGGAGGTTGGTCACTGGTTTTGCCACAACAACAACAACAACAAGAAGGACATAATAGTAATTACAATAATAATACTCTCTCAGGAATTTTCTTGACATGGAAGGAGGAACCTGTAGTTTGGGCATCAGCATGGAAACCCTAG 1377 0.4699 MHLSPYKKTHFNNNIPHLHHHHHHIHDDDASPIDMHNNTTTTNSTSLCSSDSGEPCEDGKWACKLLKECAIAISQRDSTKIHHLLWMLNELASPYGDLDQKLASYFLQALFCKATESGHRCYKTLSTVAQKSNNFDSARKLILKFQEVSPWTTFGHVAANGAILEALEGESNLHIIDISNTLCTQWPTLFEALATRNDETPRLRLTVVALSSTTVSSVMKEVGQRMEKFARLMGVPFEFNVINGLDRLGELTKESLGITNDEAIAVNCIGALRRIEVEERESAIRMFRSLNPKVVTVVEEEADFSSNRNDFVQCFEECLKFYGLYFEMLEESFPLTSNERLMLERDCSRSIVRVLACGGGDEQNNNKEEFEDCCERRERGRQWCEKLKKEFSGAKFSDDVVDDVKALLKRYRGGWSLVLPQQQQQQEGHNSNYNNNTLSGIFLTWKEEPVVWASAWKP* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1090 458 Pfam GRAS domain family 64 457 IPR005202 -
Ahy8g1090 458 PANTHER PROTEIN SHORT-ROOT-LIKE 34 457 - -
Ahy8g1090 458 ProSiteProfiles GRAS family profile. 53 457 IPR005202 -
Ahy8g1090 458 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 34 457 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1090 Ahy-Chr8 25942662 25944551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1090 58 458 GRAS Transcription Factor Family AT4G37650 50.239 3.31e-139 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy8g1090 GRAS 2.80E-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1090 - - ahf:112773020 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0294 18 2425410 2427375 Ahy8g1090 8 25942662 25944551 hybridization
Ahy19g1001 19 16008832 16011199 Ahy8g1090 8 25942662 25944551 PCT
Ahy9g0768 9 12170053 12172517 Ahy8g1090 8 25942662 25944551 PCT