Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1084 ATGCCAAGAACCCAATCACCTAAAATTGACGGCTTTAAAGAAGTAGAAGGCCTTAAAGAAGTAGAAGGTTTGGGAAGACCTGTCACTCTTGAGCTGATAGTGTATCCCGGAGAGGATGTGGTCGCAAAGCTATTGAAGGTTTGGAAAGCAAGCAATTACTCTAGCTATGTAGTTTCAGCCTCTGGTCATATATCAAAAGCCGCAATTGGCAAACCAAGCTCAGATATGTTTCATATATATGATGGACACTTTGAGATTCTGTCTTTGTCTGGAAGTTGTTGTGTGAATCAAGAAGATGGTTATGCAGATTGGAGTCTGGGCATCACTTTGGCTGATTCTGATAGTGATAGAGAGGCTTTTGGTGGCACCTTCATCAATACATTAATAGCTTCTGGCACTGTATCTGTTGGTATATTGAACTTTGTGAAAGAAGAGGAAAAGAGCACCGAGAAAAACTGCGATGAAACTGGAATGTTTTTTGAGAAGAAGAAGCAGGGGAAGAGAATCAAGAGGTCTTCATCTTCTGCCAAGGATAAAAAAATTGATGGCCTTAAAGAAGTAAAAGTTTCTGGAAGCAGGCCTATCCTTTTTGAGTTGACTGTGTATTCCGGACAGGATGTGGTCGCAAAGCTATGGAAGCTTTGGGAAGCAAGCAATCGATCTAGCTATATAATTTCAGCTTCAGGTCATATATCAAAAGCTGCAATTGGCAAACCAAGCTCAGATATGTTTCATATATATGATGGACATTTTGAGATTCTGACTCTCTCTGGAAGTTGTGTGAATGAAGAAGATGGTTCTACAGATTGGTATTTGGGCATCACACTAGCTGATTCTGATAGTGACATAGAGGCATTTGGTGGCAGCTCCATCAATACATTGATAGCTTCTGACACTGTATCTCTTCTTATGCTGAACTTTGTGAAAGAAGAGGAAAAGAGCACCGAGAAAAACTGCGATGAAACTGGAACTTCTGCTAAGTCTTCCTCTACAACTGGTGGTGTGCTGATGTCCCTGCTCCTTGCCCTTGGGAAGAAAATAATGGGATTCTTTTCGAATCCGATGGTCAACGAGAGTGATAAGGAAAAACTAATTTGA 1098 0.4089 MPRTQSPKIDGFKEVEGLKEVEGLGRPVTLELIVYPGEDVVAKLLKVWKASNYSSYVVSASGHISKAAIGKPSSDMFHIYDGHFEILSLSGSCCVNQEDGYADWSLGITLADSDSDREAFGGTFINTLIASGTVSVGILNFVKEEEKSTEKNCDETGMFFEKKKQGKRIKRSSSSAKDKKIDGLKEVKVSGSRPILFELTVYSGQDVVAKLWKLWEASNRSSYIISASGHISKAAIGKPSSDMFHIYDGHFEILTLSGSCVNEEDGSTDWYLGITLADSDSDIEAFGGSSINTLIASDTVSLLMLNFVKEEEKSTEKNCDETGTSAKSSSTTGGVLMSLLLALGKKIMGFFSNPMVNESDKEKLI* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1084 365 CDD DUF296 193 297 IPR005175 -
Ahy8g1084 365 SUPERFAMILY AF0104/ALDC/Ptd012-like 197 309 - -
Ahy8g1084 365 CDD DUF296 32 136 IPR005175 -
Ahy8g1084 365 ProSiteProfiles PPC domain profile profile. 191 330 IPR005175 -
Ahy8g1084 365 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 32 162 IPR039605 GO:0003680
Ahy8g1084 365 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 199 318 IPR039605 GO:0003680
Ahy8g1084 365 PANTHER DUF296 DOMAIN PROTEIN 32 162 - -
Ahy8g1084 365 PANTHER DUF296 DOMAIN PROTEIN 199 318 - -
Ahy8g1084 365 Gene3D - 31 164 - -
Ahy8g1084 365 Gene3D - 196 330 - -
Ahy8g1084 365 SUPERFAMILY AF0104/ALDC/Ptd012-like 32 143 - -
Ahy8g1084 365 Pfam Plants and Prokaryotes Conserved (PCC) domain 199 308 IPR005175 -
Ahy8g1084 365 Pfam Plants and Prokaryotes Conserved (PCC) domain 34 142 IPR005175 -
Ahy8g1084 365 ProSiteProfiles PPC domain profile profile. 22 164 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1084 Ahy-Chr8 25862634 25865580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1084 198 308 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 36.522 1.56e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1084 - - adu:107461351 682.945