Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1062 ATGTTCATTGATGAAGCAGATACTTGTGTGATCTTCGATAATTTTTGCAAGGAAGAGGATATGGCTGCGCATGCTTCTTCTGAGATTATTAAGTATGATGTCTTCCTCAGCTTCAGAGGCACAGACACTCGCTGTGGTTTTCTCAGCCATCTGCGCAAGGAATTAGAGGACAAACACATCAAGACATACGTGGATAATATGCTCAGAGAAGGAACTGAAATATCACACTCACTCCTTGCAGCCATTGAACAATCAGAAATTGCTTTGATCATATTCTCCCAGGATTATGCTTCTTCCAAATGGTGTTTGGAAGAACTAGCCAAAATAATGGAATGCAGGAAACAAAATGGTCAAATTGTAATACCTATTTTCCATAATGTAGACCCATTATGGGTGCGCCACCAAAAGGAAAGTTATCACCACGCCCTTGCTAATCATGAGGTGAGGTTTGCAGACAGGGTGCAAATATGGAGAGATGCTCTCAAGGAAGCTGCCAATTTGTCTGGTTTCGATTCACAGTCATCACGCTTCAAGGATGATGCTGACCTTGTTGGTCAAATTGTCAAACGTGTCTTACAAAGGTTAAACCAATCACCCCAAGGTGATTTGCAGGGTCTTGTTGGAATTCATGGACCAATTGAAAAGCTAGTTTCGTTGTGCACGGAATCTGAAGATGTTATTATTGGCCTTTGGGGCATGGGTGGTGTTGGTAAGACAACTCTTGCGACTGCAGTTTTCAATAGATTGTGTGATGGATTTGAAGGATTTTGCTTCTTGAAAAATGTAAGAGAAAGAGCTGAGAAATATGGTATAGATCATTTGAAGACAGAACTTCTTTCCAAACTGCTAAAGGAAGAAGATGCAAGTCCCTTTGTCACGCCTGGTGGAATAACTAATTTTGCCAAGAAAAGACTTGGTCGAACAAAGGTTCTTGTTGTTCTTGATGATGTCAATGATTCAGACCAAATGGAAGATTTATGTGGAGGACATACACGGTTTGGGGCAAGTAGCAAAATCATAGCGACAACAAGAGATAAGCATGTCCTTCTTAGGGCGGACACTGATCATATTCATCAAGTTAAGACATTGAATTCTGATGATTCCCTTCAGCTTTTCAGCCTGAATGCCTTCAAGCAAAACTGCATTATAAAAGCAGAACAAGTTGAGTTGTCCAAGAGAGTGCTTAACTATTGCAAAGGCCTTCCTTTAGCAATAAAAATCTTGGGTTCCTTCCTTAAAGGAAAAACTCAACAAGAGTGGGAAAGTGAACTGGCCAAACTTGAAAAGACGCCTGATGAAAAAATCCAAAGAATATTACGATTGAGTTATAATGAATTAGATCGTAATGATCGGAATATATTTTTGGAACTTGCATGTTTCTTTGATAGAAATACAGAAGAAGAAGAGCAGATAAAATCTCTTCTTGATCACTGTGGATACACAACTACTATCGGGTTGACAAATCTTTGTAATAAAGCTCTTATTTCCATTTCAAACGATTGTGTGTCAATGCATGACTTAATTCGAGAAATGGGCCGTGAAATTGTTCGCGGAGAATGTCTAGATGATCCAGGAAAACGCAGTAGACTATGGGATTCTTGTGATACCTATGAAGTACTGAAATACAATAAGGTAAGCAATTGA 1644 0.3936 MFIDEADTCVIFDNFCKEEDMAAHASSEIIKYDVFLSFRGTDTRCGFLSHLRKELEDKHIKTYVDNMLREGTEISHSLLAAIEQSEIALIIFSQDYASSKWCLEELAKIMECRKQNGQIVIPIFHNVDPLWVRHQKESYHHALANHEVRFADRVQIWRDALKEAANLSGFDSQSSRFKDDADLVGQIVKRVLQRLNQSPQGDLQGLVGIHGPIEKLVSLCTESEDVIIGLWGMGGVGKTTLATAVFNRLCDGFEGFCFLKNVRERAEKYGIDHLKTELLSKLLKEEDASPFVTPGGITNFAKKRLGRTKVLVVLDDVNDSDQMEDLCGGHTRFGASSKIIATTRDKHVLLRADTDHIHQVKTLNSDDSLQLFSLNAFKQNCIIKAEQVELSKRVLNYCKGLPLAIKILGSFLKGKTQQEWESELAKLEKTPDEKIQRILRLSYNELDRNDRNIFLELACFFDRNTEEEEQIKSLLDHCGYTTTIGLTNLCNKALISISNDCVSMHDLIREMGREIVRGECLDDPGKRSRLWDSCDTYEVLKYNKVSN* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1062 547 ProSiteProfiles TIR domain profile. 30 195 IPR000157 GO:0007165
Ahy8g1062 547 Gene3D - 26 200 IPR035897 -
Ahy8g1062 547 Pfam NB-ARC domain 214 447 IPR002182 GO:0043531
Ahy8g1062 547 SMART till_3 31 167 IPR000157 GO:0007165
Ahy8g1062 547 Pfam TIR domain 31 208 IPR000157 GO:0007165
Ahy8g1062 547 Gene3D - 208 358 IPR027417 -
Ahy8g1062 547 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 456 IPR027417 -
Ahy8g1062 547 SUPERFAMILY Toll/Interleukin receptor TIR domain 30 170 IPR035897 -
Ahy8g1062 547 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 545 IPR044974 GO:0006952
Ahy8g1062 547 SUPERFAMILY "Winged helix" DNA-binding domain 434 541 IPR036390 -
Ahy8g1062 547 Gene3D - 362 447 IPR042197 -
Ahy8g1062 547 PRINTS Disease resistance protein signature 304 318 - -
Ahy8g1062 547 PRINTS Disease resistance protein signature 227 242 - -
Ahy8g1062 547 PRINTS Disease resistance protein signature 398 412 - -
Ahy8g1062 547 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 24 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1062 Ahy-Chr8 25654950 25656973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1062 32 533 WRKY Transcription Factor Family AT4G12020 30.784 1.52e-59 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1062 - - ahf:112705135 1085.09