Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1041 ATGGGGCATCACTCTTGCTGCAACAAGCAGAAGGTCAAAAGAGGCCTTTGGTCACCAGAAGAAGATGAAAAACTCATCAACTACATCACCACCTATGGCCATGGTTGTTGGAGTTCTGTCCCTAAACTTGCAGGGTTGCAGAGGTGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATCTCAGACCTGATTTGAAACGTGGAAGCTTCTCTCCTCAAGAAGCAGCTCTCATTATTGACCTCCATAGCATTCTAGGCAACAGGTGGGCTCAGATTGCAAAGCACCTACCTGGAAGAACAGATAATGAGGTGAAAAACTTTTGGAATTCAAGCATCAAGAAGAAGCTTCTTTCCCATGATGTTCTTGTTCCTTCTTTGGCCACATTTTCTGATCATCATATCCATCATCATCATCATCATGGCCTTATTGCCAATAATAATGGTTCTTCCTTAGAAACTTTCTTCCCTGAAAACCCTATCCTAAACCCTCAGCTATACCTTCCAATAATCCCATCATCAATCCTTCAAGCTTTTGATCAACAAAATGTTATTGATATCAAGCAGCAGCAGCTTGATAACAATAACATTAATTATAACAATAATGGCAACAACTTCCATCACCATATTCAAATGCCTGCAGAAACAGTAGTAGTACCATCCATGAACACTACTGTTAATCCATCATCTTTGTATGAAGATACTTGGTCATCATCATCATCATTTGGATGTGTGCTACCTCTTCAAGAAGATCATCAGATTTCCAAAAATAGTAGTGATCATGATATTGCCATCACTGCTGCCACCCCATCAAACTATATTATTGATAAACTCATCATCAATAATCCAGTTAGTACTACATGGCAGCAGCATTTTGATCTTCATCACTTGATGGAACCAATTGTGCCAAAAGTCTGTGATATTAATAACACGAACATCATTGAGGATTATATTTGTGGCTTACCATATTCACCTGCTTCATCATCACAACAAGATCCTCTTGCTAGAATCCATTGTTACACCACTACTACTACTACTACTACACCTGCTTCTGCTGCTGCTATTTGTCCACAAGATCAAGCAACTCTTCTAGCTGCAAATCATCATCAATTGGAACAACAACACATTGATAATAATAATAATAATCCCCTCATCATTCCATCATCATTGCCATCATCAACATCTTCTTCATCAGCATCACTCTATCAAGCAGATCACATTTAG 1221 0.3874 MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIDLHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHDVLVPSLATFSDHHIHHHHHHGLIANNNGSSLETFFPENPILNPQLYLPIIPSSILQAFDQQNVIDIKQQQLDNNNINYNNNGNNFHHHIQMPAETVVVPSMNTTVNPSSLYEDTWSSSSSFGCVLPLQEDHQISKNSSDHDIAITAATPSNYIIDKLIINNPVSTTWQQHFDLHHLMEPIVPKVCDINNTNIIEDYICGLPYSPASSSQQDPLARIHCYTTTTTTTTPASAAAICPQDQATLLAANHHQLEQQHIDNNNNNPLIIPSSLPSSTSSSSASLYQADHI* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1041 406 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy8g1041 406 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy8g1041 406 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy8g1041 406 PANTHER MYB DOMAIN PROTEIN 55 1 349 - -
Ahy8g1041 406 CDD SANT 17 61 IPR001005 -
Ahy8g1041 406 MobiDBLite consensus disorder prediction 376 406 - -
Ahy8g1041 406 PANTHER TRANSCRIPTION FACTOR MYB26 1 349 - -
Ahy8g1041 406 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy8g1041 406 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Ahy8g1041 406 Gene3D - 69 140 - -
Ahy8g1041 406 Gene3D - 11 67 - -
Ahy8g1041 406 CDD SANT 69 109 IPR001005 -
Ahy8g1041 406 SMART sant 66 114 IPR001005 -
Ahy8g1041 406 SMART sant 13 63 IPR001005 -
Ahy8g1041 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy8g1041 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1041 Ahy-Chr8 25259095 25260901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1041 1 118 MYB Transcription Factor Family AT3G13890 95.763 1.04e-80 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy8g1041 Myb_DNA-binding 1.60E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1041 K09422 - gmx:102662609 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0254 18 2077909 2079784 Ahy8g1041 8 25259095 25260901 hybridization