Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1000 ATGGCAGGGTTCAGCACCAACAATAACAATAACGAAGGAAGAGATCACTTCAATTTAGGGCGCTTTGTTCCACATCTTTTCAATCTCCACCTCCAAACCCCTAACAACAACAACAACAACAACAACCCCTTAACGCATCACCACCACCACCAACAACAATTCGACTCTCCTCCTCCTCCTGCACCTGCTGAAGCTGACGGTGATGCTGCTGGTGGTTCAAGAAGCGGAGGAGTATCCGCTGAACCCTCAACTGGGCGCCGTCCGAGGGGCCGTCCAGCAGGATCCAAGAACAAGCCCAAACCGCCTATCGTAGTCACGCGGGACAGCCCCAATGCACTCCGCTGTCACGTGCTTGAGGTCTCCGCCGGGGCGGAGCTCCTCGACGCACTCTCCACCTACGCTCGCCGGAGGGGGAGAGGCGTTTGCGTCCTCAGCGGCACTGGCACCCTCGCTAACGTTACGCTTCGCCAGCCTGGAGGCACAGTCGTAACCCTTCACGGAACCTTCGAGATCCTCTCCATCACCGGGACAATTCTCCCGCCGCCTGCTCCACCTGGATCCGGAGGGATTTCGGTGTACCTGTCCGGCGGGCAAGGGCAGGTGGTCGGGGGGAACGTGGTGGCTCCTCTTGTGGCTTCAGCTGTTGTGGTTCTGATGGCTGCTTCGTTTGCAAATGCAATGTTTGAGAGATTGCCTTTGAATTTGGACGATGATGATCCTCGTGAGGACGATGACCACTTCAATCACCAACGACAACCTGCAGCATCGCAATCCTCTGGCGTAACTGGCCAGATCGCCGACGGCGCCAGCAGTGGTGGTCGCGCTGTTTCTTTCTTCAATTCGGCTGCAGGTGTTGGTGGTGGAGGAAGGGGTTTGAACGGCAGAAGCGGCTATCCCTTGTCGCTTCCCAGCGGCGGCGATCTATTTGGATGGGGCGGTGGTGGTGGTGCAGGTGCAAGTGCAGCAGCGGCGATCAAGCCTCCACCGTTCTAG 993 0.578 MAGFSTNNNNNEGRDHFNLGRFVPHLFNLHLQTPNNNNNNNNPLTHHHHHQQQFDSPPPPAPAEADGDAAGGSRSGGVSAEPSTGRRPRGRPAGSKNKPKPPIVVTRDSPNALRCHVLEVSAGAELLDALSTYARRRGRGVCVLSGTGTLANVTLRQPGGTVVTLHGTFEILSITGTILPPPAPPGSGGISVYLSGGQGQVVGGNVVAPLVASAVVVLMAASFANAMFERLPLNLDDDDPREDDDHFNHQRQPAASQSSGVTGQIADGASSGGRAVSFFNSAAGVGGGGRGLNGRSGYPLSLPSGGDLFGWGGGGGAGASAAAAIKPPPF* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1000 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 21 281 IPR014476 GO:0003680
Ahy8g1000 330 MobiDBLite consensus disorder prediction 235 250 - -
Ahy8g1000 330 MobiDBLite consensus disorder prediction 251 266 - -
Ahy8g1000 330 MobiDBLite consensus disorder prediction 235 268 - -
Ahy8g1000 330 ProSiteProfiles PPC domain profile profile. 110 250 IPR005175 -
Ahy8g1000 330 MobiDBLite consensus disorder prediction 30 47 - -
Ahy8g1000 330 Gene3D - 113 236 - -
Ahy8g1000 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 21 281 - -
Ahy8g1000 330 CDD DUF296 114 179 IPR005175 -
Ahy8g1000 330 MobiDBLite consensus disorder prediction 30 108 - -
Ahy8g1000 330 Pfam Plants and Prokaryotes Conserved (PCC) domain 114 224 IPR005175 -
Ahy8g1000 330 SUPERFAMILY AF0104/ALDC/Ptd012-like 111 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1000 Ahy-Chr8 23656723 23658430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1000 83 234 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 72.393 8.39e-67 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1000 - - aip:107609871 452.981