Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0988 ATGTCAAAGTCTCCCTCTCTTGAGAAGCACCAGTCCGTTTATTCTTCTTCTGAGCCTAGGGAGTTTATTATGGCTACAGAAATAGAGGATCCCGAGTCTACTATGTCAACAGTTGCTAAGCTTGTGGAGCAACTGCATGCCAAGTTGTCATCAGCACAAGAGAAGGAACTTATCACAACACGATTGCTAGGTATTGCCAGGAGAAGAAAGGATGGCAGGGCACTTATTGGCACTCATTCTCAAGCGATGCCATTGTTCATAAACATTCTTAGAAATGGAACCTCTCTTGCGAAAGTTAATGTTGCTACTATTCTCAGTGTACTGTGCAAAGATGAAGACTTGAGGTTAAAAGTTCTTCTTGGTGGTTGTGTCCCACCATTGCTGTCAATTTTAAAATATGAATCAACTGATGCAAGAAAGGCGGCAGCTGAAGCAATATATCAAGTTTCCATCGGAGGTCTGTCAGAAGATCATGTTGGTATGAAAATTTTTGTTACAGAAGATGTAGTTCCAACGTTGTGGAATCTACTAAGTCCTAAGAACAAGCAAGACAAAATTGTTGAGGGTTTTATTACTGGAGCATTAAGAAATTTGTGTGGTGACAAAGATGGCTACTGGAATGCAACATTAGAAGCTGGAGGTATTGAAATCATTGTGGATCTCTTGTCTTCAGACAATGCTGTTTCTCAGTCAAATGCAGCTTCTCTGTTGGCACGTCTAATGTCGGCTTTCAGTGGTAGCATCCCAAAAGTAATAGACTCTGGAGCAGTTAAAGCTTTAGTTCGACTTGTAGGGGAGGAAAACAATATTTCTGTTCGAGCTGGTGCTGCTGATGCTCTAGAGGCCCTTTCTTCAAAGTCAACCAATGCGAAGAAAGGTATTGTTGATTCTGATGGTGTTCAAATCCTTATTGGAGCCATAGTTGCTCCTTCAAAAGAATGTATGCAATCTGATGGCGGCCAGGCTCTTCAAGGGCATGCAACACGAGCTCTAGCCAATTTATCTGGTGGCATGCCTGCATTAATAATATATCTTGCAGAACTTTCCTGTTCTCCTCGTTTGACAGCTCCAGTTGGTGATATAATAGGCGCTCTTGCTTACACTCTTATGGTCTTTGAGGAAAAAGTTGATGATGATCAGGATCATTTTGATGCAACTAAGATAGAGGATATTTTAGTAACTCTTTTAAAGCCTCGAGATAACAAGCTTATTCAAGAGCGTGTCCTTGAGGCCATGGCTAGCCTATATGGTAATGTCTATCTCTCGAAGTTTCTCTATCAAGCAGACTCAAAGAAGGTTCTCATTGGGCTTATAACTATGGCTGCCATTGATGTGCAAGGGTATTTGATACGTTCACTGACAAGCTTGTGCTGTGACAGGGTAGGAATATGGGAGGCGATAAAAAAAAGAGAAGGTATTCAGTTACTTATATCTATGCTGGGATTATCTAGTGAGCAGCATCAAGAGTACTCGGTTGAACTGCTAGCAATCTTAACTGACCAAGTTGAGGACAGCAAGTGGGCAATCACTGCTGCTGGAGGGATTCCACCATTGGTGCAGTTGCTGGAGACAGGATCGCAAAAAGCAAGAGAGGAAGCAGCTCATGTTCTTTGGAGTTTGTGTTGTCACAGTGAAGACATCCGTGCTTGCGTTGAAATTGCTGGGGCCATTCCAGCATTTCTGTGGCTTCTTAAGAGTGGTGGACCAAAAGGACAAGAAGCTTCTGCTTTGGCACTGATGAAGCTTGTCAGAGTTGCTGATTCTGCAACGATAAATCAGCTATTAGCAATGCTCCTAGGAGATTCTCCAACCTCAAAGGGACATATAATCCGAGTTTTAGGTCATGTACTTACTGTGGTTTCACAGAAAGATCTTGTGGAAAAGGGATGTGCAGCAAATAAAGGCCTAAGATGTCTTGTTCAGGTTATCAATGCATCAAATGAGGAAACCCAAGAATTTGCAACTTCAGCGATAGCTAATTTATTTACCACAAGACAAGACATTTGTGATGGTCTAGTAAATGAAGACCTTGTGCTTCCTTTAATGAAGCTTCTGACTAACAAAAATCAAGGTGTGGCCATTCAGTCAGCTCGAGCATTAAGTTCTCTATCACGTCCAACCAATAGCAAAGCTGCAAATAAGTTGTCTTATATAGTACTTGAAGGAGATGTTCAACCACTAATTAAGTTGGCTAAAACATGCTGTGTGGATGATGCAGAAACTTCTGTTGCTGCTTCTGAATCTGCTGTTGCTGCATTGGCCAACCTTCTTTTTGATCCTTATATTGCTGCCGAGGCCCTGGCTGAAGATGTTGTTCCAGCTTTAACAAGAATTCTGGAGAAAGGAACCTTGGAAGGTAAACAAAATGCATCACGAGCTCTTCATGAATTATTGAAGCATTTTTCAGTAGGAGATCTTCTTAAGGGAGACGAACAGTGCCGTTTAACTTTGCTAGCCCTTGTTGATTCGTTAAGATCTATGCATATAGATGAGACTGAAGCTGCAGATGCTTTAGATGTGATTGCATTGCTAGCTAGGACAAAACATGATGTCAGCCTCACTTATCCTCCATTGTTGGTTCTGGCTGATAAATCTTGCTTAGAACCCCTTGTCTGCTGCCTTGCTGATGGTCCACCTATTGTGCAAGACAAGGCAATTGAAATTTTGTCCAGACTTTGTGGAGATCAGCCAGTTGTTCTTGGTGACTTGTTGTCTTCTAGTTCCAGATGCACTGGATCATTAGCTCATAGAATAATTAACTCTGCTAGTTTAGAAGTAAAAGTTGGAGCAGCTGCCTTACTAATTTGCACTGTAAAGGATAAGAAAGAGCTCTCAATGGATTTGCTTGACACTTCTGGATATCAAAAACCATTGATTTACTCCTTAGTTGACATGATGAAGCAAAGTTCTAATTGTTCATTGTTAGAAATCGAAGTTTGCACCCCTAGAGGTTTTATGGAGAAGAATGCATTTCCAGAAGTTGATGAGTCAGAAATTCCTGATGCAGCCACAGTCTTGGGTGGTACTGTTGCCTTGTGGTTACTCTCAATTATTGCTTCTGTCCAGGTAACAAACAAATTAATAATTTTGGAAGCTGGTGGACTGGAAATTCTCTCTGAGAAACTTGCAAGACATGTCTCAAATCCACAGGCACAATATGAGGATACTGAAGAAATATGGATCAGCGCATTACTCTTGGCCATTTTATTTCAAGATACAAAGGTCATTCAATCTCCTGCAACAATGTGCACTGTACCTTCTCTGAATCTACTTCTAACATCTGAGGAAGTAATTGACAAATATTTTGCTGCCCAGGCTATGGCTAGTCTTGTTCAAAATGGTGATAAGGGAATAGGTCTTGCCGTTGCAAATTCTGGTGCTGTCCCAGGATTGATAACTATGATTGGGCATATAGAAACAGATATGCCAAATCTCATGGCTTTATCAGATGAGTTTTCCTTGGTGCGAACTCCTGATCAAGTTGTTTTGGATCATCTATTTGAAATTGAGGATGTAAGACTGGGATCTGTTGCACGGAAATCTATACCTCTTTTAGTAGATCTCTTGAAACCAATACCAGAAAGGCCCGGTGCTCCAGCAGCTGCCCTTAGACTCTTGATTTCCCTTGCAGATGGGAGTGATACAAATAAATTAATACTTGCTGAAGCTGGAGCTCTGGAGGCTTTGAACAAATACCTGTCCTTGAGCCCTCAAGACACTACTGAGGCTACTATTTCTGACTTACTGAGAATATTATATTGCAATTCTGACCTAATTAATCATGAAGCATCAACAAATTCACTGAACCAACTCATAGCTGTTTTGCGTCTTGGTTCAAGAAATTCTAGATATAGTGCAGCTAGAGCACTCCATGAACTCTTTGATTCTGTGAATATTAGAGACTCAGAATTAGCTAAACAGGCCGTTCATCCATTGGTTGACATGCTGAATAATACGTCAGGAAGTGAGCAGGAGGCTGCTTTAATGGCCTTGGTCAAGTTAATGTCAGGAAATTCTTCAAAAGCATCTCTGTTTATTGATGTGGAAGGCAACCCCCTTGAAAGTTTACACAAAATATTGTCCTCCGCTTCATCCTTGGAGTTGAAGAATTATGCTGCGCAACTCTGCTTTGTACTGTTTGGTAATAGTAAGATCAGAGCAGAACGAATTGCCTCAGAATGCATAGAACCCCTTATATCACTGATGCAGTCTGATTCTGAGAGTGCGATAGAGTCTGGGGTTTGTGCTTTTGACAGATTGTTAGAAGATGAACATCAGGTAGAGCTTGCAGCAGCCTGCAACATCGTGGATTTCCTTGTCAGCTTGGTTTCTGGTACAAACTATCAGCTTATTGAGGCAACCATATCTGTTCTCCTCAGATTGGGCAAAGATAGGACTCCAACCAAATTAGACATGGTCAAATCTGGAATTATTAATAACTGTCTCAAGCTACTACCATTAGCACCTAGCTCATTATGCTCTACTATAGCTGAGCTGTTTCGCATCTTAACAAATAGTAATGCAATTGCCAGAAGTTCAGAGGCTGCAAAAATTGTAGAACCCCTTTTCCATGTTTTGCTATGTCGAGATTTCAACTTATGGGGACAGCATAGTGCCTTACAAGCACTTGTAAACATATTGGAAAAGCCACAAAGTCTTGCAACTTTAAAGCTTACACCTAGTGAAGTTATTGAACCCTTGATTTCTTTTCTGGAATCCCCATCCCAAGCTATTCAGCAACTTGGCACAGAACTCTTAGCTCATATTCTTGCACAGGAGCATTTTCAACAGGATATTTCAACAAAAAATGCAGTTCCACCTCTTGTACAGCTTGCAGGAATTGGAATATTGAACTTGCAACAAACAGCAATAAAAGCATTGGAAAAACTTTCCAAAACCTGGCCAAAGGCAGTTGCTGATGCCGGAGGTATTTTTGAGCTTGCAAAGGTTATTATTCAAGATGATCCTCAACCGCCACATGCACTCTGGGAATCAGCTGCTTTAGTTCTCTCTAATATATTATATTCTGATGCGGATTACTATTTTAAAGTTCCTGTGGCGGTTCTTGTAAAACTGTTAAACTCAAAAGTTGAGAATACAGTTAGCATAGCCCTTAACGCATTAGTAGTTCATGACACAAGTGATGCTTCAAGTGCTGAACAGATGGTGGAAGCTGGAGCTATAGATGCTCTGCTGGACCTTCTAAGATCTCATAATTGTGAAGAAGCATCTGGTAGATTACTCGAAGCTTTATTCAACAATGTGAAAGTACGAGAGATGAAGATGTCGAAGTATGCTATAGCACCATTATCACAGTATCTATTAGATCCGCATACCAAATCAGAGCCTGGCAAGCTTCTTGCTGCTTTAGCTCTAGGAGATCTTTCACAGTACGAGGGACATGCTAGAGCTAGTGACTCAGTTTCTGCATGCCGTGCATTGATAAGTTTACTTGAAGATCAGCCAACTGAAGAAATGAAGATGGTGGCTATATGTGCATTGCAGAACTTCGTCATGAACAGCAGGACCAACAGAAGAGCTGTTGCAGAAGCTGGGGGCATATTGGTGATTCAGGAATTGCTGCTGTCTCTAAATACAGAAGTTGCTGCACAAGCAGCATTGCTGATCAAATTTTTGTTCTCTACCCACACTCTACAAGAATATGTGTCAAATGAGCTAATCAGGTCTTTGACAGCTTCATTGGAAAGAGAGTTGTGGTCAACTGCCACAATCAATGAAGAGGTTTTGAAAACACTGCATGTGATATTCATGAACTTCCCTAAGCTCCATGTGTCCGAAGCTGCAACACTTTGTATTCCTCATTTGGTAGGAGCTCTTAAATCTGGTGGTGAAGCAGCTCAGGACTCCGTACTTGATACCTTTTGCTTGCTGAAACAATCTTGGTCAACTATGCCAATAGATATTGCAAAGTCTCAGGCTATAGTTGCTGCTGAAGCGATCCCCATCTTGCAAATGCTCATGAAAACCTGCCCACCAAGCTTCCATGAGAAGGCAGATTCTCTTCTGCACTGCTTACCAGGTTGTTTGACTGTCATCATTAAGCGTGGAAATAACCTCAAGCAAACTATGGGAGGTACATATGCATTTTGCAGGTTGACAATAGGCAATGGTCCTCCAAACCAAACCAAGATGGTTCATGGTACTTCTCCAGAATGGAAAGAAGGATTCACGTGGGCATTTGATGTGCCTCCAAAGGGCCAAAAACTTCATATTGTGTGCAAAAGCAAGAATACTTTTGGGAAGACAACTCTCGGAAGAGTCACTATCCAAATCGATAAAGTTGTGACTGAAGGAGTTTATAGCGGAATATTCAGTCTTAATCATCATGATGGCAATAAAGACGGTTCATCCCGAACTCTTGAAATTGAGGTTATGTGGTCCAATAGGATTTCTGATGAAGATATTTAA 6429 0.4125 MSKSPSLEKHQSVYSSSEPREFIMATEIEDPESTMSTVAKLVEQLHAKLSSAQEKELITTRLLGIARRRKDGRALIGTHSQAMPLFINILRNGTSLAKVNVATILSVLCKDEDLRLKVLLGGCVPPLLSILKYESTDARKAAAEAIYQVSIGGLSEDHVGMKIFVTEDVVPTLWNLLSPKNKQDKIVEGFITGALRNLCGDKDGYWNATLEAGGIEIIVDLLSSDNAVSQSNAASLLARLMSAFSGSIPKVIDSGAVKALVRLVGEENNISVRAGAADALEALSSKSTNAKKGIVDSDGVQILIGAIVAPSKECMQSDGGQALQGHATRALANLSGGMPALIIYLAELSCSPRLTAPVGDIIGALAYTLMVFEEKVDDDQDHFDATKIEDILVTLLKPRDNKLIQERVLEAMASLYGNVYLSKFLYQADSKKVLIGLITMAAIDVQGYLIRSLTSLCCDRVGIWEAIKKREGIQLLISMLGLSSEQHQEYSVELLAILTDQVEDSKWAITAAGGIPPLVQLLETGSQKAREEAAHVLWSLCCHSEDIRACVEIAGAIPAFLWLLKSGGPKGQEASALALMKLVRVADSATINQLLAMLLGDSPTSKGHIIRVLGHVLTVVSQKDLVEKGCAANKGLRCLVQVINASNEETQEFATSAIANLFTTRQDICDGLVNEDLVLPLMKLLTNKNQGVAIQSARALSSLSRPTNSKAANKLSYIVLEGDVQPLIKLAKTCCVDDAETSVAASESAVAALANLLFDPYIAAEALAEDVVPALTRILEKGTLEGKQNASRALHELLKHFSVGDLLKGDEQCRLTLLALVDSLRSMHIDETEAADALDVIALLARTKHDVSLTYPPLLVLADKSCLEPLVCCLADGPPIVQDKAIEILSRLCGDQPVVLGDLLSSSSRCTGSLAHRIINSASLEVKVGAAALLICTVKDKKELSMDLLDTSGYQKPLIYSLVDMMKQSSNCSLLEIEVCTPRGFMEKNAFPEVDESEIPDAATVLGGTVALWLLSIIASVQVTNKLIILEAGGLEILSEKLARHVSNPQAQYEDTEEIWISALLLAILFQDTKVIQSPATMCTVPSLNLLLTSEEVIDKYFAAQAMASLVQNGDKGIGLAVANSGAVPGLITMIGHIETDMPNLMALSDEFSLVRTPDQVVLDHLFEIEDVRLGSVARKSIPLLVDLLKPIPERPGAPAAALRLLISLADGSDTNKLILAEAGALEALNKYLSLSPQDTTEATISDLLRILYCNSDLINHEASTNSLNQLIAVLRLGSRNSRYSAARALHELFDSVNIRDSELAKQAVHPLVDMLNNTSGSEQEAALMALVKLMSGNSSKASLFIDVEGNPLESLHKILSSASSLELKNYAAQLCFVLFGNSKIRAERIASECIEPLISLMQSDSESAIESGVCAFDRLLEDEHQVELAAACNIVDFLVSLVSGTNYQLIEATISVLLRLGKDRTPTKLDMVKSGIINNCLKLLPLAPSSLCSTIAELFRILTNSNAIARSSEAAKIVEPLFHVLLCRDFNLWGQHSALQALVNILEKPQSLATLKLTPSEVIEPLISFLESPSQAIQQLGTELLAHILAQEHFQQDISTKNAVPPLVQLAGIGILNLQQTAIKALEKLSKTWPKAVADAGGIFELAKVIIQDDPQPPHALWESAALVLSNILYSDADYYFKVPVAVLVKLLNSKVENTVSIALNALVVHDTSDASSAEQMVEAGAIDALLDLLRSHNCEEASGRLLEALFNNVKVREMKMSKYAIAPLSQYLLDPHTKSEPGKLLAALALGDLSQYEGHARASDSVSACRALISLLEDQPTEEMKMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSLNTEVAAQAALLIKFLFSTHTLQEYVSNELIRSLTASLERELWSTATINEEVLKTLHVIFMNFPKLHVSEAATLCIPHLVGALKSGGEAAQDSVLDTFCLLKQSWSTMPIDIAKSQAIVAAEAIPILQMLMKTCPPSFHEKADSLLHCLPGCLTVIIKRGNNLKQTMGGTYAFCRLTIGNGPPNQTKMVHGTSPEWKEGFTWAFDVPPKGQKLHIVCKSKNTFGKTTLGRVTIQIDKVVTEGVYSGIFSLNHHDGNKDGSSRTLEIEVMWSNRISDEDI* 2143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0988 2142 SUPERFAMILY ARM repeat 1011 1296 IPR016024 -
Ahy8g0988 2142 SMART arm_5 665 705 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 711 758 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 544 584 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 111 151 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 1213 1253 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 1591 1632 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 1423 1463 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 244 285 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 1715 1756 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 759 799 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 854 894 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 201 242 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 623 663 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 1382 1422 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 1841 1881 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 460 500 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 287 336 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 158 200 IPR000225 GO:0005515
Ahy8g0988 2142 SMART arm_5 501 542 IPR000225 GO:0005515
Ahy8g0988 2142 ProSiteProfiles C2 domain profile. 1995 2111 IPR000008 -
Ahy8g0988 2142 SUPERFAMILY ARM repeat 1658 2012 IPR016024 -
Ahy8g0988 2142 Gene3D - 247 418 IPR011989 -
Ahy8g0988 2142 Gene3D - 1607 2012 IPR011989 -
Ahy8g0988 2142 Gene3D C2 domain 2013 2137 IPR035892 -
Ahy8g0988 2142 Gene3D - 1169 1300 IPR011989 -
Ahy8g0988 2142 Gene3D - 1001 1155 IPR011989 -
Ahy8g0988 2142 SUPERFAMILY ARM repeat 296 461 IPR016024 -
Ahy8g0988 2142 SUPERFAMILY ARM repeat 82 899 IPR016024 -
Ahy8g0988 2142 Gene3D - 21 244 IPR011989 -
Ahy8g0988 2142 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 255 299 IPR000225 GO:0005515
Ahy8g0988 2142 Pfam Armadillo/beta-catenin-like repeat 506 541 IPR000225 GO:0005515
Ahy8g0988 2142 Gene3D - 1301 1606 IPR011989 -
Ahy8g0988 2142 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2013 2132 IPR035892 -
Ahy8g0988 2142 Gene3D - 714 980 IPR011989 -
Ahy8g0988 2142 Gene3D - 427 713 IPR011989 -
Ahy8g0988 2142 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 6 2141 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Ahy8g0988 2142 PANTHER - 6 2141 - -
Ahy8g0988 2142 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 513 555 IPR000225 GO:0005515
Ahy8g0988 2142 CDD C2 2016 2105 - -
Ahy8g0988 2142 Pfam C2 domain 2015 2113 IPR000008 -
Ahy8g0988 2142 SMART C2_3c 2015 2110 IPR000008 -
Ahy8g0988 2142 SUPERFAMILY ARM repeat 1265 1633 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0988 Ahy-Chr8 20641413 20655528 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0988 459 582 U-box Gene Family AT3G46510 39.516 8.90e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0988 - - gmx:100796864 3395.13