Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0985 ATGGAAGAAGTAAAAGACTGCTGCTCCAGCAATACCACCGCCACGAGAAGCAGAGGAAGAAGAAGCAGCAGCACTGGCAGCTCTTCAGAGAAACGCAAACAGCAGCAGCAGCAACAACAACAACAAGAAGAGAAGCCGTACAGAGGAATAAGGATGAGGAAGTGGGGGAAGTGGGTGGCGGAGATTAGAGAACCAAACAAGAGGTCAAGGATATGGCTGGGTTCATACACAACACCGGTGGCCGCCGCACGCGCCTACGACACCGCCGTGTTCTACCTGAGAGGGCCATCTGCGCGCCTCAACTTCCCTGAGTTGTTGCTGCAAGAGCAAACCGAAGCCGTCGAAGGAGACATCACTGCCGATTCCATACGCAAAAGAGCCACACAGGTTGGTGCCAGAGTGGACGCCGCTCTTCAGGCCTCATCAAACTCTGTTAATTCCAGCCAGACCACTTCCGAAAAACCAGACTTGAACAAGGTTCCAAAATCCGAGGAAACTGAAGAAGATTCTCTTGACCAAGATTAA 525 0.52 MEEVKDCCSSNTTATRSRGRRSSSTGSSSEKRKQQQQQQQQQEEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELLLQEQTEAVEGDITADSIRKRATQVGARVDAALQASSNSVNSSQTTSEKPDLNKVPKSEETEEDSLDQD* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0985 174 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 5 167 - -
Ahy8g0985 174 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Ahy8g0985 174 MobiDBLite consensus disorder prediction 7 45 - -
Ahy8g0985 174 Gene3D AP2/ERF domain 46 104 IPR036955 GO:0003700|GO:0006355
Ahy8g0985 174 MobiDBLite consensus disorder prediction 138 156 - -
Ahy8g0985 174 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Ahy8g0985 174 Pfam AP2 domain 47 95 IPR001471 GO:0003700|GO:0006355
Ahy8g0985 174 SUPERFAMILY DNA-binding domain 46 104 IPR016177 GO:0003677
Ahy8g0985 174 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 5 167 - -
Ahy8g0985 174 MobiDBLite consensus disorder prediction 138 174 - -
Ahy8g0985 174 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Ahy8g0985 174 PRINTS Ethylene responsive element binding protein signature 85 105 IPR001471 GO:0003700|GO:0006355
Ahy8g0985 174 MobiDBLite consensus disorder prediction 1 49 - -
Ahy8g0985 174 CDD AP2 47 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0985 Ahy-Chr8 19290488 19292056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0985 27 148 AP2-EREBP Transcription Factor Family AT1G46768 62.500 6.26e-52 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy8g0985 AP2 3.00E-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0985 K09286 - jre:109020552 192.2