Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0954 ATGAACGAAGGGGAGCAACTATGCGACGCCGCCAGGAACGGCGACGCCGAAAAGCTGAAGTCCCTGATAGATTCCGGCGCCGACGTTAGCCACTTCGACGCGGAGGGCCTCACTCCTCTTATGCACGCTGCAAAGCAAGGGCACGCAAACATCCTCTCCATCCTTCTCTCTGCTGGCGCCCCATGGAACGCCCTCTCTCCTTCCAACCTCTCCGCCGGTGACTTCGCCATGGAAGCAGGCCATCAAGAGGCCTACGAGCTCCTCCTCAATGCCGGGATTCAGGCTGAACTGGTCCTGGGTACAATTGCAAGAAAAGAAAATAAAAATGCCGATTCCGGTCATGATTACTTGGAAGATAGGGTCAGTTTCAGCGAAGACAAACTTATGGACACTGATAGCAAGGCTGTGATGATGGCATGGGAGAAGCCTTTGATGGAGGCTCATGCTAAAGCTGTTTGTTCGGGTGGTGGTCACATACTCAATATTGGATTCGGAATGGGTCTTGTCGATACGGCCATTCAGCAGTATGCACCTGCCACTCACACCATTGTTGAGGCTCATCCGGAGGTTTATGAACGCATGCTTGGTACAGGATGGGGGAAGAAGGAAAATGTGAAGATTGTTTTTGGTCGCTGGCAAGATGCTCTGTCTCAGCTTGAAACATATGATGGAATTTTCTTCGATACCTATGGGGAGTACTATGAAGACCTGAGAGAGTTCCACCAACATCTTCCTGCACTGTTGAAGCCAGGTGGGATCTATTCATTCTTCAATGGCCTTTGTGGTGGTAATGCATTTTTTCATGTTGTGTATTGCCATTTGGTTTCCCTTGAGCTCGAGAATTTGGGTTATTCCACGCAATTGATTCCTTTGCCCGTTAAGGATTGTTTGGGAGAAGAAGTTTGGGAAGGTGTAAAACACAGATATTGGCAGCTTGATACATACTACCTCCCTGTCTGTCAGTCTTTAGAGGATCCTGAGTGA 984 0.4919 MNEGEQLCDAARNGDAEKLKSLIDSGADVSHFDAEGLTPLMHAAKQGHANILSILLSAGAPWNALSPSNLSAGDFAMEAGHQEAYELLLNAGIQAELVLGTIARKENKNADSGHDYLEDRVSFSEDKLMDTDSKAVMMAWEKPLMEAHAKAVCSGGGHILNIGFGMGLVDTAIQQYAPATHTIVEAHPEVYERMLGTGWGKKENVKIVFGRWQDALSQLETYDGIFFDTYGEYYEDLREFHQHLPALLKPGGIYSFFNGLCGGNAFFHVVYCHLVSLELENLGYSTQLIPLPVKDCLGEEVWEGVKHRYWQLDTYYLPVCQSLEDPE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0954 327 ProSiteProfiles Ankyrin repeat profile. 35 67 IPR002110 GO:0005515
Ahy8g0954 327 CDD AdoMet_MTases 159 254 - -
Ahy8g0954 327 SMART ANK_2a 35 64 IPR002110 GO:0005515
Ahy8g0954 327 SMART ANK_2a 68 97 IPR002110 GO:0005515
Ahy8g0954 327 SMART ANK_2a 2 31 IPR002110 GO:0005515
Ahy8g0954 327 Gene3D Vaccinia Virus protein VP39 107 322 IPR029063 -
Ahy8g0954 327 PANTHER GUANIDINOACETATE N-METHYLTRANSFERASE 4 322 - -
Ahy8g0954 327 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 320 IPR029063 -
Ahy8g0954 327 ProSiteProfiles Arginine and arginine-like N-methyltransferase domain profile. 109 327 IPR026480 -
Ahy8g0954 327 ProSiteProfiles Ankyrin repeat region circular profile. 35 60 - -
Ahy8g0954 327 PIRSF Rmt2 1 115 IPR017408 GO:0016274
Ahy8g0954 327 PIRSF Rmt2 103 324 IPR017408 GO:0016274
Ahy8g0954 327 Pfam Ankyrin repeats (3 copies) 8 94 IPR002110 GO:0005515
Ahy8g0954 327 SUPERFAMILY Ankyrin repeat 7 95 IPR036770 -
Ahy8g0954 327 Gene3D - 2 106 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0954 Ahy-Chr8 18367791 18369703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0954 10 132 Miscellaneous Gene Families AT5G02620 28.226 2.85e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0954 K18477 - gmx:100527621 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3238 17 134475548 134477514 Ahy8g0954 8 18367791 18369703 hybridization