Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0950 ATGACTAGAGTTGGACCCCACTCTGAAATGAGCTGCAACGGTTGCCGGGTGCTCCGCAAGGGATGCAGCGACATGTGCCCCCTGAGGACATGCCTTCACTGGATTCCATCCCCTCAGGCACAAGCTCACGCCACTCTCTTCCTCGCTAAGTTCTTTGGCCGCTCCGATCTCTTCTCCTTCATTTCCTCTGTCCCACACAACAACAGGCCCGAGCTGTTTCAGTCTCTGCTTTATGAAGCTTGCGGACGAACCATCAATCCCGTCAATGGCGCTGTGGGCCTGCTCTCCACTGGTAACTGGCACCTCTGCGAGGCCGCCCTCCGCACTGTCCTTGCCGGCGGCGTCCTCACCGCGTTGCCGGAGGAGGTCATCATGCCAGTCTTAGACGACTCTTCCGCTTCTCATGCTGCTCTTCATTTCAACAACACAAGCTTATCAGAGGCGTCCAAGAGGCGCAGCGTTAGCGGTGTTTCAACGCCACCCGCTGTGTCAGTTGTTTCGGGAGAACCATCGGAGATGACCTTGATGAGCTTTGATGATGGCATTTGCAGTCACAACCAGAGAAAACTCTTGAATCTTTTCGTGTAA 588 0.551 MTRVGPHSEMSCNGCRVLRKGCSDMCPLRTCLHWIPSPQAQAHATLFLAKFFGRSDLFSFISSVPHNNRPELFQSLLYEACGRTINPVNGAVGLLSTGNWHLCEAALRTVLAGGVLTALPEEVIMPVLDDSSASHAALHFNNTSLSEASKRRSVSGVSTPPAVSVVSGEPSEMTLMSFDDGICSHNQRKLLNLFV* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0950 195 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Ahy8g0950 195 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 10 195 - -
Ahy8g0950 195 ProSiteProfiles LOB domain profile. 10 116 IPR004883 -
Ahy8g0950 195 PANTHER LOB DOMAIN-CONTAINING PROTEIN 10 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0950 Ahy-Chr8 18302838 18303856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0950 10 121 AS2 family AT3G49940 71.429 3.37e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy8g0950 LOB 7.90E-24 No_clan