Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0943 ATGGAAACGGATATTCCGGTGGCCAATTACACTTACATGGGCAGGACTTTCACTCAACTCGCCCTCGGTGACCATTCCTCTTCTGCTTTCAGCGACTGCAACAGCGACAGATCTGGCGAGTTCTCCACCACTTCCTCACAAGCTCGCCGCCTCTTTATTGCCTGCACCGCCGACAACTCCCACGACCTCATCACCCACCTCGTCACCGAACTCCAATCCTCTTCCATCGAAGACCAAAAACAAGCTGCCATGGAGATCAGACTTCTCGCCAAGAACAAGCCCGAAAACCGCCTCAAGATCGCCAAAGCTGGCGCCATCAAACCTTTAATCTCCCTCATTTCATCTCAGGACCTTCAGCTTCAGGAATACGGCGTCACCGCCATTCTCAACCTCTCCCTCTGCGATGACAATAAAGACGCCATCGCTTCTTCCGGAGCGATTAAGCCCCTTGTTCGTGCACTCAAGACGGGTACTCCAGCGGCCAAAGAGAACGCCGCCTGCGCTCTCCTTCGGCTCTCGCAGGTGGAAGAGAACAAGCCGGCGATAGGGAAGTGCGGGGCGATTCCGCCGCTGGTAAGCCTTCTAGAAAGCGGCGGTTTACGAGCCAAAAAGGATGCGTCCACGGCGCTGTACTCGCTGTGCTCGTCAGTAAAGGAGAACAAGATCAAGGCAGTCAAGGCGGGGATCATGAAAGTGCTGGTGGAGCTCATGGCAGACTTCGGTGGGAATATGGTAGACAAGTCAGCTTATGTGGCAAGCGTTTTGGTTTCGGTAATGGAGGCAAGGGCAACTCTGGTGGAGGAAGGAGGGATACCTGTGCTAGTGGAGATGGTGGAGGTTGGGACGCAAAGGCAGAAGGAAATAGCGGCGGTTATTCTGTTACAGGTGTGCCAAGACTGCGTGATTTACCGTACGATGGTGGCGCGCGAAGGTGCGATTCCTCCTCTGGTTGCTCTGTCGCAGAACGGCACCAACCGCGCCAAGCAAAAGGCGGAGACACTGATAGAACTTCTACGGCAACCAAGATCCGGCAACGGCGCTGCTCCTCCTACATCATAA 1059 0.5486 METDIPVANYTYMGRTFTQLALGDHSSSAFSDCNSDRSGEFSTTSSQARRLFIACTADNSHDLITHLVTELQSSSIEDQKQAAMEIRLLAKNKPENRLKIAKAGAIKPLISLISSQDLQLQEYGVTAILNLSLCDDNKDAIASSGAIKPLVRALKTGTPAAKENAACALLRLSQVEENKPAIGKCGAIPPLVSLLESGGLRAKKDASTALYSLCSSVKENKIKAVKAGIMKVLVELMADFGGNMVDKSAYVASVLVSVMEARATLVEEGGIPVLVEMVEVGTQRQKEIAAVILLQVCQDCVIYRTMVAREGAIPPLVALSQNGTNRAKQKAETLIELLRQPRSGNGAAPPTS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0943 352 Gene3D - 41 177 IPR011989 -
Ahy8g0943 352 Gene3D - 253 340 IPR011989 -
Ahy8g0943 352 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 104 146 IPR000225 GO:0005515
Ahy8g0943 352 SUPERFAMILY ARM repeat 60 335 IPR016024 -
Ahy8g0943 352 Gene3D - 178 252 IPR011989 -
Ahy8g0943 352 PANTHER U BOX DOMAIN-CONTAINING 1 347 - -
Ahy8g0943 352 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE ISOFORM X1 1 347 - -
Ahy8g0943 352 SMART arm_5 93 133 IPR000225 GO:0005515
Ahy8g0943 352 SMART arm_5 257 298 IPR000225 GO:0005515
Ahy8g0943 352 SMART arm_5 134 174 IPR000225 GO:0005515
Ahy8g0943 352 SMART arm_5 175 215 IPR000225 GO:0005515
Ahy8g0943 352 SMART arm_5 300 340 IPR000225 GO:0005515
Ahy8g0943 352 Pfam Armadillo/beta-catenin-like repeat 94 132 IPR000225 GO:0005515
Ahy8g0943 352 Pfam Armadillo/beta-catenin-like repeat 177 215 IPR000225 GO:0005515
Ahy8g0943 352 Pfam Armadillo/beta-catenin-like repeat 135 173 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0943 Ahy-Chr8 18161389 18163579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0943 28 345 U-box Gene Family AT2G23140 46.646 4.12e-81 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0943 - - gmx:100797550 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3228 17 134359770 134362365 Ahy8g0943 8 18161389 18163579 hybridization