Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0912 ATGCCGCCGCTCGCTGATTGTCGCTTCTTCAGATTCATAATCCCCAACATGGAGAATCAAATTAGATTGCCAGTGCCCTTCTCCAACGGTGTACGGGATAACATGAGCAACCCCGTCGAGGTAATCACAACAAACGGTCAGTCGTGGAGCATCTCGTGGGTTGTGGAGGAGGAGCATCCGCATCAAATCGTATTTACCGGAGGCTGGCGAGCCTTTTACGAACACTACCACCTTCGAATCGGTGACTCAATGCTGCTATCGTATCACCAACCGAAGTTTTTCTATGTGGCCATCCACGACACAAGATACTGCGAGATCAACTACGGAAGAAACTTGAGAAACAGAAGTCTTCCGGTAATACCCGCACATGGCAACTATACAGTCCAGTTCTTCGCGATAATCCCGGTTAACGACCCTGATACACTGAAGCTCCCGCTGCGATTCTCCCGGGAATATGGCCGGTCCCTACCGCGACCACTGACCCTAACCACGCCTACAGGACATCGTCATCGCGTGGGCTGGAATATGCAACCTAATGGGAGGATCGTGCTTCATGGAGGATGGGACGATGTCCGGGCACGCTATGGCCTAAGGGATGAGTGGCTTGTGCTGTTCCGTTATCACACCGTTCAGAGCACAATGTACGTCATGTTCTTCAACGGTCATACTATGGAAATCAACTACTTGGACCATGCGGGCCCGAGGACGGACTGCACTTGTATAACCAATCCGTCGGCCCCCAGGTCAAGGCACATAGCCGATGGGTTCAGATCGACCAATCCGTTCTTTGTAAGTCCAATAATGCACCGCCTGGCAAACCGTTTTCTTCCGAATGTCCCCCCTCTGCCGGGAGTATGCAAGGATAGCCCAATTACGATTACCAACGAGAGGGGCGCGTGGACCGTTCGGTATACGCACTATGTCGGGAGGACGAACGGATGCTTTGGAATTGGCTGGTCTGCCTTAGCAACTGCATGCCAACTAAGACACGGCCATGTTTGTGTCTTCGAACGGCTGGCGCCGCAAGAATACCGGCTGCATATATATTGA 1050 0.5229 MPPLADCRFFRFIIPNMENQIRLPVPFSNGVRDNMSNPVEVITTNGQSWSISWVVEEEHPHQIVFTGGWRAFYEHYHLRIGDSMLLSYHQPKFFYVAIHDTRYCEINYGRNLRNRSLPVIPAHGNYTVQFFAIIPVNDPDTLKLPLRFSREYGRSLPRPLTLTTPTGHRHRVGWNMQPNGRIVLHGGWDDVRARYGLRDEWLVLFRYHTVQSTMYVMFFNGHTMEINYLDHAGPRTDCTCITNPSAPRSRHIADGFRSTNPFFVSPIMHRLANRFLPNVPPLPGVCKDSPITITNERGAWTVRYTHYVGRTNGCFGIGWSALATACQLRHGHVCVFERLAPQEYRLHIY* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0912 349 ProSiteProfiles B3 DNA-binding domain profile. 127 222 IPR003340 GO:0003677
Ahy8g0912 349 Gene3D - 125 222 IPR015300 -
Ahy8g0912 349 Gene3D - 5 104 IPR015300 -
Ahy8g0912 349 Pfam B3 DNA binding domain 18 100 IPR003340 GO:0003677
Ahy8g0912 349 Gene3D - 241 349 IPR015300 -
Ahy8g0912 349 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 124 230 - -
Ahy8g0912 349 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 8 109 - -
Ahy8g0912 349 SUPERFAMILY DNA-binding pseudobarrel domain 9 108 IPR015300 -
Ahy8g0912 349 PANTHER B3 DOMAIN-CONTAINING 8 109 - -
Ahy8g0912 349 SUPERFAMILY DNA-binding pseudobarrel domain 259 349 IPR015300 -
Ahy8g0912 349 ProSiteProfiles B3 DNA-binding domain profile. 6 102 IPR003340 GO:0003677
Ahy8g0912 349 SUPERFAMILY DNA-binding pseudobarrel domain 130 225 IPR015300 -
Ahy8g0912 349 PANTHER B3 DOMAIN-CONTAINING 124 230 - -
Ahy8g0912 349 SMART B3_2 130 222 IPR003340 GO:0003677
Ahy8g0912 349 SMART B3_2 9 102 IPR003340 GO:0003677
Ahy8g0912 349 CDD B3_DNA 8 100 IPR003340 GO:0003677
Ahy8g0912 349 CDD B3_DNA 140 220 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0912 Ahy-Chr8 17677260 17678671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0912 142 228 B3 DNA Binding Superfamily AT3G18990 35.632 4.73e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy8g0912 B3 7.40E-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0912 - - ahf:112746889 674.855